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P56936 (REPA1_BUCAI) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable replication-associated protein repA1
Gene names
Name:repA1
Ordered Locus Names:BUpL01
Encoded onPlasmid pLeu (pBAp1)
OrganismBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium) [Reference proteome] [HAMAP]
Taxonomic identifier107806 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length283 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein is essential for plasmid replication; it is involved in copy control functions By similarity.

Sequence similarities

Belongs to the IncFII RepA family.

Ontologies

Keywords
   Biological processDNA replication
Plasmid copy control
   Technical termComplete proteome
Plasmid
Reference proteome
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: UniProtKB-KW

plasmid maintenance

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 283283Probable replication-associated protein repA1
PRO_0000216227

Sequences

Sequence LengthMass (Da)Tools
P56936 [UniParc].

Last modified May 30, 2000. Version 1.
Checksum: 5A27ED464A6E04BD

FASTA28332,933
        10         20         30         40         50         60 
MIIRKCYINN PNPFFTPPKN NKRRPSFICY AMKRASEIDV ARCELNYILQ IKNIKIGFPV 

        70         80         90        100        110        120 
KRFRRLNEHR ACAMRAMVLA MLYHFNISSD LVQASVEQLS DECGLSTLSK AGNKSITRAS 

       130        140        150        160        170        180 
RLITNFMEPM GFVTCKKTWD KILGNYMPKM ITLTPLFFML FGVSEKKLMD AKKQQLGWIN 

       190        200        210        220        230        240 
KNLISKGFKP ITMIDAKRRS KDTQIKNIFQ YRISKHAFYK KKRNAQRLIS LDEKEARQTI 

       250        260        270        280 
LRALVAKYSI TELTKLGPNG LKKQVNISYY YLRKIATNTY PDN 

« Hide

References

« Hide 'large scale' references
[1]"Molecular characterization of the Leucine plasmid from Buchnera aphidicola, primary endosymbiont of the aphid Acyrthosiphon pisum."
Soler T., Latorre A., Sabater B., Silva F.J.
Curr. Microbiol. 40:264-268(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ006878 Genomic DNA. Translation: CAB56190.1.
AP001071 Genomic DNA. Translation: BAA95420.1.
RefSeqNP_057965.1. NC_002253.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA95420; BAA95420; BAA95420.
GeneID1109453.
KEGGbuc:BUpL01.
PATRIC21243491. VBIBucAph127364_0007.

Phylogenomic databases

eggNOGNOG148650.
HOGENOMHOG000011617.
OMANEHRARA.
OrthoDBEOG6X3W3C.
ProtClustDBCLSK539682.

Enzyme and pathway databases

BioCycBAPH107806:GBZJ-609-MONOMER.

Family and domain databases

InterProIPR003446. Plasmid_replication_init_RepA.
[Graphical view]
PfamPF02387. IncFII_repA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameREPA1_BUCAI
AccessionPrimary (citable) accession number: P56936
Secondary accession number(s): Q9R6R5
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 30, 2000
Last modified: March 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Buchnera aphidicola (subsp. Acyrthosiphon pisum)

Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names