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Protein

DNA-binding protein PYRAB09250

Gene

PYRAB09250

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-binding protein PYRAB09250UniRule annotation
Gene namesi
Ordered Locus Names:PYRAB09250
ORF Names:PAB0620
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001215601 – 115DNA-binding protein PYRAB09250Add BLAST115

Proteomic databases

PRIDEiP56813

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB0620

Structurei

3D structure databases

ProteinModelPortaliP56813
SMRiP56813
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PDCD5 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04179 Archaea
COG2118 LUCA
HOGENOMiHOG000194121
KOiK06875
OMAiRLNTVKM
OrthoDBiPOG093Z0OC7

Family and domain databases

Gene3Di1.10.8.140, 1 hit
HAMAPiMF_00026 dsDNA_bind, 1 hit
InterProiView protein in InterPro
IPR022889 DNA_bind_arc
IPR002836 PDCD5-like
IPR036883 PDCD5-like_sf
PANTHERiPTHR10840 PTHR10840, 1 hit
PfamiView protein in Pfam
PF01984 dsDNA_bind, 1 hit
PIRSFiPIRSF015730 TFAR19, 1 hit
SUPFAMiSSF46950 SSF46950, 1 hit

Sequencei

Sequence statusi: Complete.

P56813-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MREVAEDIEE IRRRKLLELQ RKYLEQQKAQ EEEARQQALI EAQIQAILRK
60 70 80 90 100
ILTPEARERL ARVRLVRPEL ARQVELILVQ LYQAGQITER IDDAKLKKIL
110
AQIEARTRRE FRIKW
Length:115
Mass (Da):13,881
Last modified:May 30, 2000 - v1
Checksum:iEB0E82DC5155DF54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248285 Genomic DNA Translation: CAB49839.1
HE613800 Genomic DNA Translation: CCE70333.1
PIRiF75140

Genome annotation databases

EnsemblBacteriaiCAB49839; CAB49839; PAB0620
KEGGipab:PAB0620
PATRICifig|272844.11.peg.979

Similar proteinsi

Entry informationi

Entry nameiY925_PYRAB
AccessioniPrimary (citable) accession number: P56813
Secondary accession number(s): G8ZI92
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 30, 2000
Last modified: May 23, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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