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P56784

- MATK_ARATH

UniProt

P56784 - MATK_ARATH

Protein

Maturase K

Gene

matK

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 2 (17 Jan 2003)
      Previous versions | rss
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    • Comment

    Functioni

    Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.UniRule annotation

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. mRNA processing Source: UniProtKB-KW
    2. RNA splicing Source: UniProtKB-HAMAP
    3. tRNA processing Source: UniProtKB-KW

    Keywords - Biological processi

    mRNA processing, tRNA processing

    Keywords - Ligandi

    RNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Maturase KUniRule annotation
    Alternative name(s):
    Intron maturaseUniRule annotation
    Gene namesi
    Name:matKUniRule annotation
    Synonyms:ycf14
    Ordered Locus Names:AtCg00040
    Encoded oniPlastid; Chloroplast
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chloroplast

    Organism-specific databases

    TAIRiATCG00040.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Chloroplast, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 504504Maturase KPRO_0000143247Add
    BLAST

    Proteomic databases

    PaxDbiP56784.
    PRIDEiP56784.

    Expressioni

    Gene expression databases

    GenevestigatoriP56784.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the intron maturase 2 family. MatK subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG282935.
    HOGENOMiHOG000149139.

    Family and domain databases

    HAMAPiMF_01390. MatK.
    InterProiIPR024937. Domain_X.
    IPR002866. Maturase_MatK.
    IPR024942. Maturase_MatK_N.
    [Graphical view]
    PfamiPF01348. Intron_maturas2. 1 hit.
    PF01824. MatK_N. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P56784-1 [UniParc]FASTAAdd to Basket

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    MDKFQGYLEF DGARQQSFLY PLFFREYIYV LAYDHGLNRL NRNRYIFLEN    50
    ADYDKKYSSL ITKRLILRMY EQNRLIIPTK DVNQNSFLGH TSLFYYQMIS 100
    VLFAVIVEIP FSLRLGSSFQ GKQLKKSYNL QSIHSIFPFL EDKLGHFNYV 150
    LDVLIPYPIH LEILVQTLRY RVKDASSLHF FRFCLYEYCN WKNFYIKKKS 200
    ILNPRFFLFL YNSHVCEYES IFFFLRKRSS HLRSTSYEVL FERIVFYGKI 250
    HHFFKVFVNN FPAILGLLKD PFIHYVRYHG RCILATKDTP LLMNKWKYYF 300
    VNLWQCYFSV WFQSQKVNIN QLSKDNLEFL GYLSSLRLNP LVVRSQMLEN 350
    SFLIDNVRIK LDSKIPISSI IGSLAKDKFC NVLGHPISKA TWTDSSDSDI 400
    LNRFVRICRN ISHYYSGSSK KKNLYRIKYI LRLCCVKTLA RKHKSTVRTF 450
    LKRLGSGLLE EFLTGEDQVL SLIFPRSYYA SKRLYRVRIW YLDILYLNDL 500
    VNHE 504
    Length:504
    Mass (Da):60,366
    Last modified:January 17, 2003 - v2
    Checksum:i8180D4D71BE55574
    GO

    Sequence cautioni

    The sequence BAA84366.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti3 – 31K → Q in strain: cv. Cvi-1.
    Natural varianti119 – 1191F → L in strain: cv. Per-1 and cv. Ser-1.
    Natural varianti496 – 4961Y → F in strain: cv. Ei-2.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP000423 Genomic DNA. Translation: BAA84366.1. Different initiation.
    AF144348 Genomic DNA. Translation: AAG43317.1.
    AF144370 Genomic DNA. Translation: AAG43339.1.
    AF144371 Genomic DNA. Translation: AAG43340.1.
    AF144372 Genomic DNA. Translation: AAG43341.1.
    AF144373 Genomic DNA. Translation: AAG43342.1.
    AF144374 Genomic DNA. Translation: AAG43343.1.
    AF144375 Genomic DNA. Translation: AAG43344.1.
    AF144376 Genomic DNA. Translation: AAG43345.1.
    AF144377 Genomic DNA. Translation: AAG43346.1.
    AF144378 Genomic DNA. Translation: AAG43347.1.
    RefSeqiNP_051040.2. NC_000932.1.

    Genome annotation databases

    EnsemblPlantsiATCG00040.1; ATCG00040.1; ATCG00040.
    GeneIDi844797.
    KEGGiath:ArthCp003.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP000423 Genomic DNA. Translation: BAA84366.1 . Different initiation.
    AF144348 Genomic DNA. Translation: AAG43317.1 .
    AF144370 Genomic DNA. Translation: AAG43339.1 .
    AF144371 Genomic DNA. Translation: AAG43340.1 .
    AF144372 Genomic DNA. Translation: AAG43341.1 .
    AF144373 Genomic DNA. Translation: AAG43342.1 .
    AF144374 Genomic DNA. Translation: AAG43343.1 .
    AF144375 Genomic DNA. Translation: AAG43344.1 .
    AF144376 Genomic DNA. Translation: AAG43345.1 .
    AF144377 Genomic DNA. Translation: AAG43346.1 .
    AF144378 Genomic DNA. Translation: AAG43347.1 .
    RefSeqi NP_051040.2. NC_000932.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi P56784.
    PRIDEi P56784.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi ATCG00040.1 ; ATCG00040.1 ; ATCG00040 .
    GeneIDi 844797.
    KEGGi ath:ArthCp003.

    Organism-specific databases

    TAIRi ATCG00040.

    Phylogenomic databases

    eggNOGi NOG282935.
    HOGENOMi HOG000149139.

    Gene expression databases

    Genevestigatori P56784.

    Family and domain databases

    HAMAPi MF_01390. MatK.
    InterProi IPR024937. Domain_X.
    IPR002866. Maturase_MatK.
    IPR024942. Maturase_MatK_N.
    [Graphical view ]
    Pfami PF01348. Intron_maturas2. 1 hit.
    PF01824. MatK_N. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete structure of the chloroplast genome of Arabidopsis thaliana."
      Sato S., Nakamura Y., Kaneko T., Asamizu E., Tabata S.
      DNA Res. 6:283-290(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. "Evolutionary analysis of plastidic maturase K and nuclear chalcone synthase and their utility for phylogenetic reconstructions within the Brassicaceae."
      Koch M., Mitchell-Olds T.
      Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Cvi-1, cv. Ei-2, cv. Ka-0, cv. Mrk-0, cv. Nd-1, cv. No-0, cv. Per-1, cv. Ser-1 and cv. Su-0.

    Entry informationi

    Entry nameiMATK_ARATH
    AccessioniPrimary (citable) accession number: P56784
    Secondary accession number(s): Q9G1K9
    , Q9G227, Q9GF24, Q9GF25
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2000
    Last sequence update: January 17, 2003
    Last modified: October 1, 2014
    This is version 92 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3