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Protein

Motility protein B

Gene

motB

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque-generating machinery to the cell wall (By similarity).By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Chemotaxis, Flagellar rotation

Enzyme and pathway databases

BioCyciHPY:HP0816-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Motility protein B
Alternative name(s):
Chemotaxis protein MotB
Gene namesi
Name:motB
Ordered Locus Names:HP_0816
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
Proteomesi
  • UP000000429 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 16CytoplasmicSequence analysisAdd BLAST16
Transmembranei17 – 37HelicalSequence analysisAdd BLAST21
Topological domaini38 – 257PeriplasmicSequence analysisAdd BLAST220

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001895881 – 257Motility protein BAdd BLAST257

Proteomic databases

PaxDbiP56427.
PRIDEiP56427.

Interactioni

Subunit structurei

Each stator complex is composed of 4 MotA and 2 MotB subunits. 2 A subunits and 1 B subunit are thought to form a single ion channel, so that each stator complex contains two channels (By similarity).By similarity

Protein-protein interaction databases

DIPiDIP-3662N.
IntActiP56427. 4 interactors.
MINTiMINT-177662.
STRINGi85962.HP0816.

Structurei

Secondary structure

1257
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi77 – 83Combined sources7
Beta strandi95 – 100Combined sources6
Turni101 – 103Combined sources3
Beta strandi108 – 112Combined sources5
Beta strandi115 – 120Combined sources6
Helixi122 – 124Combined sources3
Beta strandi126 – 128Combined sources3
Beta strandi129 – 131Combined sources3
Helixi136 – 149Combined sources14
Beta strandi157 – 163Combined sources7
Beta strandi171 – 173Combined sources3
Helixi177 – 194Combined sources18
Helixi199 – 201Combined sources3
Beta strandi202 – 206Combined sources5
Beta strandi216 – 218Combined sources3
Helixi219 – 225Combined sources7
Beta strandi226 – 235Combined sources10
Helixi236 – 250Combined sources15

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3CYPX-ray1.60B/C/D/E126-257[»]
3CYQX-ray2.30A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P126-257[»]
3IMPX-ray2.50A/B/C/D/E/F/G/H/I/J/K/L126-257[»]
3S02X-ray2.50A/B104-257[»]
3S03X-ray2.50A/B/C/D98-257[»]
3S06X-ray1.80A/B98-257[»]
3S0HX-ray2.10A/B/C/D91-257[»]
3S0WX-ray2.50A/B79-257[»]
3S0YX-ray1.80A/B65-257[»]
ProteinModelPortaliP56427.
SMRiP56427.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP56427.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini113 – 236OmpA-likePROSITE-ProRule annotationAdd BLAST124

Sequence similaritiesi

Belongs to the MotB family.Curated
Contains 1 OmpA-like domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108SEK. Bacteria.
COG1360. LUCA.
KOiK02557.
OMAiLWIEIEL.

Family and domain databases

CDDicd07185. OmpA_C-like. 1 hit.
Gene3Di3.30.1330.60. 1 hit.
InterProiIPR025713. MotB_N_dom.
IPR006665. OmpA-like.
[Graphical view]
PfamiPF13677. MotB_plug. 1 hit.
PF00691. OmpA. 1 hit.
[Graphical view]
SUPFAMiSSF103088. SSF103088. 1 hit.
PROSITEiPS51123. OMPA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P56427-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKKNKPTEC PAGEKWAVPY ADFLSLLLAL FIALYAISAV NKSKVEALKT
60 70 80 90 100
EFIKIFNYAP KPEAMQPVVV IPPDSGKEEE QMASESSKPA SQNTETKATI
110 120 130 140 150
ARKGEGSVLE QIDQGSILKL PSNLLFENAT SDAINQDMML YIERIAKIIQ
160 170 180 190 200
KLPKRVHINV RGFTDDTPLV KTRFKSHYEL AANRAYRVMK VLIQYGVNPN
210 220 230 240 250
QLSFSSYGST NPIAPNDSLE NRMKNNRVEI FFSTDANDLS KIHSILDNEF

NPHKQQE
Length:257
Mass (Da):28,849
Last modified:July 15, 1998 - v1
Checksum:i58C1774B0547C032
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07865.1.
PIRiH64621.
RefSeqiNP_207609.1. NC_000915.1.
WP_001085308.1. NC_000915.1.

Genome annotation databases

EnsemblBacteriaiAAD07865; AAD07865; HP_0816.
GeneIDi899358.
KEGGihpy:HP0816.
PATRICi20592919. VBIHelPyl33062_0848.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07865.1.
PIRiH64621.
RefSeqiNP_207609.1. NC_000915.1.
WP_001085308.1. NC_000915.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3CYPX-ray1.60B/C/D/E126-257[»]
3CYQX-ray2.30A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P126-257[»]
3IMPX-ray2.50A/B/C/D/E/F/G/H/I/J/K/L126-257[»]
3S02X-ray2.50A/B104-257[»]
3S03X-ray2.50A/B/C/D98-257[»]
3S06X-ray1.80A/B98-257[»]
3S0HX-ray2.10A/B/C/D91-257[»]
3S0WX-ray2.50A/B79-257[»]
3S0YX-ray1.80A/B65-257[»]
ProteinModelPortaliP56427.
SMRiP56427.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-3662N.
IntActiP56427. 4 interactors.
MINTiMINT-177662.
STRINGi85962.HP0816.

Proteomic databases

PaxDbiP56427.
PRIDEiP56427.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD07865; AAD07865; HP_0816.
GeneIDi899358.
KEGGihpy:HP0816.
PATRICi20592919. VBIHelPyl33062_0848.

Phylogenomic databases

eggNOGiENOG4108SEK. Bacteria.
COG1360. LUCA.
KOiK02557.
OMAiLWIEIEL.

Enzyme and pathway databases

BioCyciHPY:HP0816-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP56427.

Family and domain databases

CDDicd07185. OmpA_C-like. 1 hit.
Gene3Di3.30.1330.60. 1 hit.
InterProiIPR025713. MotB_N_dom.
IPR006665. OmpA-like.
[Graphical view]
PfamiPF13677. MotB_plug. 1 hit.
PF00691. OmpA. 1 hit.
[Graphical view]
SUPFAMiSSF103088. SSF103088. 1 hit.
PROSITEiPS51123. OMPA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMOTB_HELPY
AccessioniPrimary (citable) accession number: P56427
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: July 15, 1998
Last modified: November 2, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.