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Protein

Putative electron transport protein YsaA

Gene

ysaA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi12 – 121Iron-sulfur 1 (4Fe-4S)By similarity
Metal bindingi15 – 151Iron-sulfur 1 (4Fe-4S)By similarity
Metal bindingi18 – 181Iron-sulfur 1 (4Fe-4S)By similarity
Metal bindingi22 – 221Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi58 – 581Iron-sulfur 3 (4Fe-4S)By similarity
Metal bindingi61 – 611Iron-sulfur 3 (4Fe-4S)By similarity
Metal bindingi66 – 661Iron-sulfur 3 (4Fe-4S)By similarity
Metal bindingi70 – 701Iron-sulfur 4 (4Fe-4S)By similarity
Metal bindingi89 – 891Iron-sulfur 4 (4Fe-4S)By similarity
Metal bindingi92 – 921Iron-sulfur 4 (4Fe-4S)By similarity
Metal bindingi95 – 951Iron-sulfur 4 (4Fe-4S)By similarity
Metal bindingi99 – 991Iron-sulfur 3 (4Fe-4S)By similarity
Metal bindingi118 – 1181Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi121 – 1211Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi130 – 1301Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi134 – 1341Iron-sulfur 1 (4Fe-4S)By similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

4Fe-4S, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciEcoCyc:EG12277-MONOMER.
ECOL316407:JW3545-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative electron transport protein YsaA
Gene namesi
Name:ysaA
Ordered Locus Names:b3573, JW3545
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14319. ysaA.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 157157Putative electron transport protein YsaAPRO_0000159306Add
BLAST

Proteomic databases

PaxDbiP56256.

Interactioni

Protein-protein interaction databases

BioGridi4259372. 9 interactions.
IntActiP56256. 2 interactions.
STRINGi511145.b3573.

Structurei

3D structure databases

ProteinModelPortaliP56256.
SMRiP56256. Positions 1-145.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 32314Fe-4S ferredoxin-type 1PROSITE-ProRule annotationAdd
BLAST
Domaini48 – 80334Fe-4S ferredoxin-type 2PROSITE-ProRule annotationAdd
BLAST
Domaini80 – 109304Fe-4S ferredoxin-type 3PROSITE-ProRule annotationAdd
BLAST
Domaini112 – 144334Fe-4S ferredoxin-type 4PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 4 4Fe-4S ferredoxin-type domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4108XIB. Bacteria.
COG1142. LUCA.
HOGENOMiHOG000163385.
InParanoidiP56256.
OMAiNIPWQCR.
OrthoDBiEOG6XSZQF.
PhylomeDBiP56256.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
[Graphical view]
PfamiPF13247. Fer4_11. 1 hit.
[Graphical view]
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P56256-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRFIIADAT KCIGCRTCEV ACAVSHHENQ DCAALSPDEF ISRIRVIKDH
60 70 80 90 100
CWTTAVACHQ CEDAPCANVC PVDAISREHG HIFVEQTRCI GCKSCMLACP
110 120 130 140 150
FGAMEVVSSR KKARAIKCDL CWHRETGPAC VEACPTKALQ CMDVEKVQRH

RLRQQPV
Length:157
Mass (Da):17,459
Last modified:July 15, 1998 - v1
Checksum:iC0EFED5ECC376BC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC76597.1.
AP009048 Genomic DNA. Translation: BAE77720.1.
PIRiG65156.
RefSeqiNP_418030.1. NC_000913.3.
WP_001300918.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76597; AAC76597; b3573.
BAE77720; BAE77720; BAE77720.
GeneIDi948085.
KEGGiecj:JW3545.
eco:b3573.
PATRICi32122622. VBIEscCol129921_3688.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC76597.1.
AP009048 Genomic DNA. Translation: BAE77720.1.
PIRiG65156.
RefSeqiNP_418030.1. NC_000913.3.
WP_001300918.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP56256.
SMRiP56256. Positions 1-145.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259372. 9 interactions.
IntActiP56256. 2 interactions.
STRINGi511145.b3573.

Proteomic databases

PaxDbiP56256.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76597; AAC76597; b3573.
BAE77720; BAE77720; BAE77720.
GeneIDi948085.
KEGGiecj:JW3545.
eco:b3573.
PATRICi32122622. VBIEscCol129921_3688.

Organism-specific databases

EchoBASEiEB4065.
EcoGeneiEG14319. ysaA.

Phylogenomic databases

eggNOGiENOG4108XIB. Bacteria.
COG1142. LUCA.
HOGENOMiHOG000163385.
InParanoidiP56256.
OMAiNIPWQCR.
OrthoDBiEOG6XSZQF.
PhylomeDBiP56256.

Enzyme and pathway databases

BioCyciEcoCyc:EG12277-MONOMER.
ECOL316407:JW3545-MONOMER.

Miscellaneous databases

PROiP56256.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
[Graphical view]
PfamiPF13247. Fer4_11. 1 hit.
[Graphical view]
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes."
    Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.
    Nucleic Acids Res. 22:2576-2586(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYSAA_ECOLI
AccessioniPrimary (citable) accession number: P56256
Secondary accession number(s): Q2M7N6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: July 15, 1998
Last modified: June 8, 2016
This is version 115 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.