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P56080 (Y117_HELPY) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0026 protein HP_0117
Gene names
Ordered Locus Names:HP_0117
OrganismHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) [Reference proteome] [HAMAP]
Taxonomic identifier85962 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length308 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 4Fe-4S cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine Potential.

Sequence similarities

Belongs to the UPF0026 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 308308UPF0026 protein HP_0117
PRO_0000217864

Sites

Metal binding331Iron-sulfur (4Fe-4S-S-AdoMet) Potential
Metal binding371Iron-sulfur (4Fe-4S-S-AdoMet) Potential
Metal binding401Iron-sulfur (4Fe-4S-S-AdoMet) Potential

Sequences

Sequence LengthMass (Da)Tools
P56080 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: BBAA863283FBDF4B

FASTA30834,405
        10         20         30         40         50         60 
MAKENPPIVF GPVLSRRFGK SLGVDLSPSK KQCNYNCIYC ELGKAKPIER MEEVIKVETL 

        70         80         90        100        110        120 
INAIQNALNN LTTPIDVLTI TANGEPTLYP HLLELIQSIK PFLKGVKTLI LSNGSLFYEP 

       130        140        150        160        170        180 
KVQQALKEFD IVKFSLDAID LKAFERVDKP YSKDINKILE GILRFSQIYQ GQLVAEVLLI 

       190        200        210        220        230        240 
KGVNDSANNL KLIAAFLKQI NIARVDLSTI DRPSSFKAPK LSEDELLKCS LFFEGLCVSL 

       250        260        270        280        290        300 
PKRSITQAKK LISCGIDELL ALISRRPLSA EEAPLILDSN AFKHLETLLN HKQITIKKVG 


SLEFYCAF 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000511 Genomic DNA. Translation: AAD07185.1.
PIRE64534.
RefSeqNP_206917.1. NC_000915.1.
YP_006934040.1. NC_018939.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-3297N.
IntActP56080. 1 interaction.
MINTMINT-175797.
STRING85962.HP0117.

Proteomic databases

PRIDEP56080.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAD07185; AAD07185; HP_0117.
GeneID13869296.
900364.
KEGGheo:C694_00580.
hpy:HP0117.
PATRIC20591449. VBIHelPyl33062_0124.

Phylogenomic databases

eggNOGCOG0731.
OMASCGIDEL.
OrthoDBEOG6TTVP9.
ProtClustDBCLSK551645.

Enzyme and pathway databases

BioCycHPY:HP0117-MONOMER.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
InterProIPR013785. Aldolase_TIM.
IPR007197. rSAM.
[Graphical view]
PfamPF04055. Radical_SAM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY117_HELPY
AccessionPrimary (citable) accession number: P56080
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: April 16, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

Helicobacter pylori

Helicobacter pylori (strain 26695): entries and gene names