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P56049

- RL24_HELPY

UniProt

P56049 - RL24_HELPY

Protein

50S ribosomal protein L24

Gene

rplX

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation
    One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciHPY:HP1308-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L24UniRule annotation
    Gene namesi
    Name:rplXUniRule annotation
    Ordered Locus Names:HP_1308
    OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
    Taxonomic identifieri85962 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000000429: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 737350S ribosomal protein L24PRO_0000130664Add
    BLAST

    Proteomic databases

    PRIDEiP56049.

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi85962.HP1308.

    Structurei

    3D structure databases

    ProteinModelPortaliP56049.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L24P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0198.
    KOiK02895.
    OMAiIAKKEDN.
    OrthoDBiEOG6FFSDM.

    Family and domain databases

    Gene3Di2.30.30.30. 1 hit.
    HAMAPiMF_01326_B. Ribosomal_L24_B.
    InterProiIPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR003256. Ribosomal_L24.
    IPR005825. Ribosomal_L24/26_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR12903. PTHR12903. 1 hit.
    PfamiPF00467. KOW. 1 hit.
    [Graphical view]
    SMARTiSM00739. KOW. 1 hit.
    [Graphical view]
    SUPFAMiSSF50104. SSF50104. 1 hit.
    TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
    PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P56049-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKSEIKKNDI VKVIAGDDKG KVAKVLAVLP KTSQVVVEGC KVVKKAIKPT   50
    DDNPKGGFIH KEKPMHISNV KKA 73
    Length:73
    Mass (Da):7,905
    Last modified:November 1, 1997 - v1
    Checksum:i25B352DF8646BFAB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD08348.1.
    PIRiD64683.
    RefSeqiNP_208100.1. NC_000915.1.
    YP_006935229.1. NC_018939.1.

    Genome annotation databases

    EnsemblBacteriaiAAD08348; AAD08348; HP_1308.
    GeneIDi13870516.
    899034.
    KEGGiheo:C694_06755.
    hpy:HP1308.
    PATRICi20593997. VBIHelPyl33062_1369.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD08348.1 .
    PIRi D64683.
    RefSeqi NP_208100.1. NC_000915.1.
    YP_006935229.1. NC_018939.1.

    3D structure databases

    ProteinModelPortali P56049.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 85962.HP1308.

    Proteomic databases

    PRIDEi P56049.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAD08348 ; AAD08348 ; HP_1308 .
    GeneIDi 13870516.
    899034.
    KEGGi heo:C694_06755.
    hpy:HP1308.
    PATRICi 20593997. VBIHelPyl33062_1369.

    Phylogenomic databases

    eggNOGi COG0198.
    KOi K02895.
    OMAi IAKKEDN.
    OrthoDBi EOG6FFSDM.

    Enzyme and pathway databases

    BioCyci HPY:HP1308-MONOMER.

    Family and domain databases

    Gene3Di 2.30.30.30. 1 hit.
    HAMAPi MF_01326_B. Ribosomal_L24_B.
    InterProi IPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR003256. Ribosomal_L24.
    IPR005825. Ribosomal_L24/26_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR12903. PTHR12903. 1 hit.
    Pfami PF00467. KOW. 1 hit.
    [Graphical view ]
    SMARTi SM00739. KOW. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50104. SSF50104. 1 hit.
    TIGRFAMsi TIGR01079. rplX_bact. 1 hit.
    PROSITEi PS01108. RIBOSOMAL_L24. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700392 / 26695.

    Entry informationi

    Entry nameiRL24_HELPY
    AccessioniPrimary (citable) accession number: P56049
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Helicobacter pylori
      Helicobacter pylori (strain 26695): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3