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P56049

- RL24_HELPY

UniProt

P56049 - RL24_HELPY

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Protein
50S ribosomal protein L24
Gene
rplX, HP_1308
Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity.UniRule annotation
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciHPY:HP1308-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L24
Gene namesi
Name:rplX
Ordered Locus Names:HP_1308
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000429: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 737350S ribosomal protein L24UniRule annotation
PRO_0000130664Add
BLAST

Proteomic databases

PRIDEiP56049.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi85962.HP1308.

Structurei

3D structure databases

ProteinModelPortaliP56049.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0198.
KOiK02895.
OMAiIAKKEDN.
OrthoDBiEOG6FFSDM.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
HAMAPiMF_01326_B. Ribosomal_L24_B.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR12903. PTHR12903. 1 hit.
PfamiPF00467. KOW. 1 hit.
[Graphical view]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
PROSITEiPS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P56049-1 [UniParc]FASTAAdd to Basket

« Hide

MKSEIKKNDI VKVIAGDDKG KVAKVLAVLP KTSQVVVEGC KVVKKAIKPT   50
DDNPKGGFIH KEKPMHISNV KKA 73
Length:73
Mass (Da):7,905
Last modified:November 1, 1997 - v1
Checksum:i25B352DF8646BFAB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000511 Genomic DNA. Translation: AAD08348.1.
PIRiD64683.
RefSeqiNP_208100.1. NC_000915.1.
YP_006935229.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD08348; AAD08348; HP_1308.
GeneIDi13870516.
899034.
KEGGiheo:C694_06755.
hpy:HP1308.
PATRICi20593997. VBIHelPyl33062_1369.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000511 Genomic DNA. Translation: AAD08348.1 .
PIRi D64683.
RefSeqi NP_208100.1. NC_000915.1.
YP_006935229.1. NC_018939.1.

3D structure databases

ProteinModelPortali P56049.
ModBasei Search...

Protein-protein interaction databases

STRINGi 85962.HP1308.

Proteomic databases

PRIDEi P56049.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAD08348 ; AAD08348 ; HP_1308 .
GeneIDi 13870516.
899034.
KEGGi heo:C694_06755.
hpy:HP1308.
PATRICi 20593997. VBIHelPyl33062_1369.

Phylogenomic databases

eggNOGi COG0198.
KOi K02895.
OMAi IAKKEDN.
OrthoDBi EOG6FFSDM.

Enzyme and pathway databases

BioCyci HPY:HP1308-MONOMER.

Family and domain databases

Gene3Di 2.30.30.30. 1 hit.
HAMAPi MF_01326_B. Ribosomal_L24_B.
InterProi IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
PANTHERi PTHR12903. PTHR12903. 1 hit.
Pfami PF00467. KOW. 1 hit.
[Graphical view ]
SMARTi SM00739. KOW. 1 hit.
[Graphical view ]
SUPFAMi SSF50104. SSF50104. 1 hit.
TIGRFAMsi TIGR01079. rplX_bact. 1 hit.
PROSITEi PS01108. RIBOSOMAL_L24. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700392 / 26695.

Entry informationi

Entry nameiRL24_HELPY
AccessioniPrimary (citable) accession number: P56049
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 3, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi