P56044 (RL19_HELPY) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L19

Gene names

Name:	rplS
Ordered Locus Names:	HP_1147

Organism

Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) [Reference proteome] [HAMAP]

Taxonomic identifier

85962 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	118 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity. HAMAP-Rule MF_00402
Sequence similarities	Belongs to the ribosomal protein L19P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 118	118	50S ribosomal protein L19 HAMAP-Rule MF_00402		PRO_0000163465

Sequences

	Sequence		Length	Mass (Da)
	P56044 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: A151AD3A165A233F	FASTA	118	13,600
	10 20 30 40 50 60 MKNRYIQQFE DAQLKDKTMP AFKAGDTLRL GITIKEGEKT RTQYFEGVCI AIRGNGVDKT 70 80 90 100 110 FCVRKIGANN IGVEKIFPFY SESLASVEVL RVGRVRRAKL YYLRDRRGKA ARIKEVRH

References

[1]

"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE000511 Genomic DNA. Translation: AAD08191.1.
PIR	C64663.
RefSeq	NP_207938.1. NC_000915.1. YP_006935063.1. NC_018939.1.
3D structure databases
ProteinModelPortal	P56044.
ModBase	Search...
Protein-protein interaction databases
STRING	85962.HP1147.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAD08191; AAD08191; HP_1147.
GeneID	13870342. 899685.
KEGG	heo:C694_05925. hpy:HP1147.
PATRIC	20593645. VBIHelPyl33062_1201.
Phylogenomic databases
eggNOG	COG0335.
KO	K02884.
OMA	TLKVHVR.
ProtClustDB	PRK05338.
Family and domain databases
HAMAP	MF_00402. Ribosomal_L19.
InterPro	IPR001857. Ribosomal_L19. IPR018257. Ribosomal_L19_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
PANTHER	PTHR15680. PTHR15680. 1 hit.
Pfam	PF01245. Ribosomal_L19. 1 hit. [Graphical view]
PIRSF	PIRSF002191. Ribosomal_L19. 1 hit.
PRINTS	PR00061. RIBOSOMALL19.
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01024. rplS_bact. 1 hit.
PROSITE	PS01015. RIBOSOMAL_L19. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL19_HELPY

Accession

Primary (citable) accession number: P56044

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 1, 2013
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program