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P56041

- RL16_HELPY

UniProt

P56041 - RL16_HELPY

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Protein
50S ribosomal protein L16
Gene
rplP, HP_1312
Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. tRNA binding Source: UniProtKB-KW

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding, tRNA-binding

Enzyme and pathway databases

BioCyciHPY:HP1312-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L16
Gene namesi
Name:rplP
Ordered Locus Names:HP_1312
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000429: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14114150S ribosomal protein L16UniRule annotation
PRO_0000062115Add
BLAST

Proteomic databases

PRIDEiP56041.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit By similarity.UniRule annotation

Protein-protein interaction databases

DIPiDIP-3634N.
IntActiP56041. 9 interactions.
MINTiMINT-162847.
STRINGi85962.HP1312.

Structurei

3D structure databases

ProteinModelPortaliP56041.
SMRiP56041. Positions 1-133.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0197.
KOiK02878.
OMAiTFVSRMI.
OrthoDBiEOG6WHNWS.

Family and domain databases

Gene3Di3.90.1170.10. 1 hit.
HAMAPiMF_01342. Ribosomal_L16.
InterProiIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
IPR020798. Ribosomal_L16_CS.
[Graphical view]
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PRINTSiPR00060. RIBOSOMALL16.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR01164. rplP_bact. 1 hit.
PROSITEiPS00586. RIBOSOMAL_L16_1. 1 hit.
PS00701. RIBOSOMAL_L16_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P56041-1 [UniParc]FASTAAdd to Basket

« Hide

MLMPKRTKYR KQMKGRNRGK AHRGNSIAFG DIAIKAIEHG RIDSRQIESA    50
RVAMTRHIKR AGKVWIRVFP DKPLTAKPLE TRMGKGKGSV EKWVMNIKPG 100
RIVYEMLGIE EGLAREALAL AQSKLPFKTK IVTCESENEI Y 141
Length:141
Mass (Da):16,046
Last modified:November 1, 1997 - v1
Checksum:i1774627F9970A4AF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000511 Genomic DNA. Translation: AAD08351.1.
RefSeqiNP_208104.1. NC_000915.1.
YP_006935233.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD08351; AAD08351; HP_1312.
GeneIDi13870520.
900309.
KEGGiheo:C694_06775.
hpy:HP1312.
PATRICi20594005. VBIHelPyl33062_1373.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE000511 Genomic DNA. Translation: AAD08351.1 .
RefSeqi NP_208104.1. NC_000915.1.
YP_006935233.1. NC_018939.1.

3D structure databases

ProteinModelPortali P56041.
SMRi P56041. Positions 1-133.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-3634N.
IntActi P56041. 9 interactions.
MINTi MINT-162847.
STRINGi 85962.HP1312.

Proteomic databases

PRIDEi P56041.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAD08351 ; AAD08351 ; HP_1312 .
GeneIDi 13870520.
900309.
KEGGi heo:C694_06775.
hpy:HP1312.
PATRICi 20594005. VBIHelPyl33062_1373.

Phylogenomic databases

eggNOGi COG0197.
KOi K02878.
OMAi TFVSRMI.
OrthoDBi EOG6WHNWS.

Enzyme and pathway databases

BioCyci HPY:HP1312-MONOMER.

Family and domain databases

Gene3Di 3.90.1170.10. 1 hit.
HAMAPi MF_01342. Ribosomal_L16.
InterProi IPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
IPR020798. Ribosomal_L16_CS.
[Graphical view ]
PANTHERi PTHR12220. PTHR12220. 1 hit.
Pfami PF00252. Ribosomal_L16. 1 hit.
[Graphical view ]
PRINTSi PR00060. RIBOSOMALL16.
SUPFAMi SSF54686. SSF54686. 1 hit.
TIGRFAMsi TIGR01164. rplP_bact. 1 hit.
PROSITEi PS00586. RIBOSOMAL_L16_1. 1 hit.
PS00701. RIBOSOMAL_L16_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700392 / 26695.

Entry informationi

Entry nameiRL16_HELPY
AccessioniPrimary (citable) accession number: P56041
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 3, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi