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P56036 (RL10_HELPY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L10
Gene names
Name:rplJ
Ordered Locus Names:HP_1200
OrganismHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) [Reference proteome] [HAMAP]
Taxonomic identifier85962 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length164 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors By similarity. HAMAP-Rule MF_00362

Subunit structure

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processribosome biogenesis

Inferred from electronic annotation. Source: InterPro

translation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionLSU rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 16416450S ribosomal protein L10 HAMAP-Rule MF_00362
PRO_0000154641

Sequences

Sequence LengthMass (Da)Tools
P56036 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 9915415D78AF5D97

FASTA16418,606
        10         20         30         40         50         60 
MQKQHQRQHK VELVANLKSQ FADAKALLIC DYKGLSVRKL EALRNKARNQ GIKVQVIKNT 

        70         80         90        100        110        120 
LAHIAMKETG YSDLDLKETN VFLWGGDQIA LSKLVFDFQK EHKDHFVLKA GLFDKESVSV 

       130        140        150        160 
AHVEAVSKLP SKEELMGMLL SVWTAPARYF VTGLDNLRKA KEEN 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000511 Genomic DNA. Translation: AAD08246.1.
PIRH64669.
RefSeqNP_207991.1. NC_000915.1.
YP_006935120.1. NC_018939.1.

3D structure databases

ProteinModelPortalP56036.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-3052N.
IntActP56036. 3 interactions.
MINTMINT-164442.
STRING85962.HP1200.

Proteomic databases

PRIDEP56036.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAD08246; AAD08246; HP_1200.
GeneID13870400.
899962.
KEGGheo:C694_06210.
hpy:HP1200.
PATRIC20593759. VBIHelPyl33062_1257.

Phylogenomic databases

eggNOGCOG0244.
KOK02864.
OMALWGDDQI.
OrthoDBEOG6DNTDR.
ProtClustDBPRK00099.

Enzyme and pathway databases

BioCycHPY:HP1200-MONOMER.

Family and domain databases

HAMAPMF_00362. Ribosomal_L10.
InterProIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
IPR002363. Ribosomal_L10_eubac_CS.
[Graphical view]
PANTHERPTHR11560:SF8. PTHR11560:SF8. 1 hit.
PfamPF00466. Ribosomal_L10. 1 hit.
[Graphical view]
PROSITEPS01109. RIBOSOMAL_L10. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL10_HELPY
AccessionPrimary (citable) accession number: P56036
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: February 19, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Helicobacter pylori

Helicobacter pylori (strain 26695): entries and gene names