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P56036

- RL10_HELPY

UniProt

P56036 - RL10_HELPY

Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.By similarity

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
    2. protein binding Source: IntAct
    3. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciHPY:HP1200-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10
    Gene namesi
    Name:rplJ
    Ordered Locus Names:HP_1200
    OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
    Taxonomic identifieri85962 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000000429: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 16416450S ribosomal protein L10PRO_0000154641Add
    BLAST

    Proteomic databases

    PRIDEiP56036.

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.By similarity

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    rplLP558343EBI-7694828,EBI-7696366

    Protein-protein interaction databases

    DIPiDIP-3052N.
    IntActiP56036. 4 interactions.
    MINTiMINT-164442.
    STRINGi85962.HP1200.

    Structurei

    3D structure databases

    ProteinModelPortaliP56036.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.Curated

    Phylogenomic databases

    eggNOGiCOG0244.
    KOiK02864.
    OMAiMTVLAYS.
    OrthoDBiEOG6DNTDR.

    Family and domain databases

    HAMAPiMF_00362. Ribosomal_L10.
    InterProiIPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view]
    PfamiPF00466. Ribosomal_L10. 1 hit.
    [Graphical view]
    PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P56036-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQKQHQRQHK VELVANLKSQ FADAKALLIC DYKGLSVRKL EALRNKARNQ    50
    GIKVQVIKNT LAHIAMKETG YSDLDLKETN VFLWGGDQIA LSKLVFDFQK 100
    EHKDHFVLKA GLFDKESVSV AHVEAVSKLP SKEELMGMLL SVWTAPARYF 150
    VTGLDNLRKA KEEN 164
    Length:164
    Mass (Da):18,606
    Last modified:November 1, 1997 - v1
    Checksum:i9915415D78AF5D97
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD08246.1.
    PIRiH64669.
    RefSeqiNP_207991.1. NC_000915.1.
    YP_006935120.1. NC_018939.1.

    Genome annotation databases

    EnsemblBacteriaiAAD08246; AAD08246; HP_1200.
    GeneIDi13870400.
    899962.
    KEGGiheo:C694_06210.
    hpy:HP1200.
    PATRICi20593759. VBIHelPyl33062_1257.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD08246.1 .
    PIRi H64669.
    RefSeqi NP_207991.1. NC_000915.1.
    YP_006935120.1. NC_018939.1.

    3D structure databases

    ProteinModelPortali P56036.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-3052N.
    IntActi P56036. 4 interactions.
    MINTi MINT-164442.
    STRINGi 85962.HP1200.

    Proteomic databases

    PRIDEi P56036.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAD08246 ; AAD08246 ; HP_1200 .
    GeneIDi 13870400.
    899962.
    KEGGi heo:C694_06210.
    hpy:HP1200.
    PATRICi 20593759. VBIHelPyl33062_1257.

    Phylogenomic databases

    eggNOGi COG0244.
    KOi K02864.
    OMAi MTVLAYS.
    OrthoDBi EOG6DNTDR.

    Enzyme and pathway databases

    BioCyci HPY:HP1200-MONOMER.

    Family and domain databases

    HAMAPi MF_00362. Ribosomal_L10.
    InterProi IPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view ]
    Pfami PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    PROSITEi PS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700392 / 26695.

    Entry informationi

    Entry nameiRL10_HELPY
    AccessioniPrimary (citable) accession number: P56036
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Helicobacter pylori
      Helicobacter pylori (strain 26695): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3