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P56035 (RL9_HELPY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L9
Gene names
Name:rplI
Ordered Locus Names:HP_0514
OrganismHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) [Reference proteome] [HAMAP]
Taxonomic identifier85962 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Protein attributes

Sequence length149 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds to the 23S rRNA By similarity. HAMAP-Rule MF_00503

Sequence similarities

Belongs to the ribosomal protein L9P family.

Sequence caution

The sequence AAD07582.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 14914950S ribosomal protein L9 HAMAP-Rule MF_00503
PRO_0000176642

Sequences

Sequence LengthMass (Da)Tools
P56035 [UniParc].

Last modified December 13, 2001. Version 2.
Checksum: E9B40FEA264F1C95

FASTA14916,460
        10         20         30         40         50         60 
MKVLLLEDVK NLGKAGEVCE VKDGYGNNFL IANQKAKLAT NEVINKYKAE VKKKAEKEAL 

        70         80         90        100        110        120 
EKAQKLQMVE TLQTITLTIH KKVGANGSLF GAITKEEITE RLKEQHASLN LDKKDIELKH 

       130        140 
PIKSTGIYEI EVKLGSGVVG VFKIDVVAE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000511 Genomic DNA. Translation: AAD07582.1. Different initiation.
PIRB64584.
RefSeqNP_207311.1. NC_000915.1.
YP_006934435.1. NC_018939.1.

3D structure databases

ProteinModelPortalP56035.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-3673N.
IntActP56035. 3 interactions.
MINTMINT-178039.
STRING85962.HP0514.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAD07582; AAD07582; HP_0514.
GeneID13869703.
899264.
KEGGheo:C694_02645.
hpy:HP0514.
PATRIC20592305. VBIHelPyl33062_0541.

Phylogenomic databases

eggNOGCOG0359.
KOK02939.
OMAIILTHEV.
OrthoDBEOG6D8BH0.
ProtClustDBPRK00137.

Family and domain databases

Gene3D3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPMF_00503. Ribosomal_L9.
InterProIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERPTHR21368. PTHR21368. 1 hit.
PfamPF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMSSF55653. SSF55653. 1 hit.
SSF55658. SSF55658. 1 hit.
TIGRFAMsTIGR00158. L9. 1 hit.
PROSITEPS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL9_HELPY
AccessionPrimary (citable) accession number: P56035
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 13, 2001
Last modified: February 19, 2014
This is version 80 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Helicobacter pylori

Helicobacter pylori (strain 26695): entries and gene names