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P56035

- RL9_HELPY

UniProt

P56035 - RL9_HELPY

Protein

50S ribosomal protein L9

Gene

rplI

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 84 (01 Oct 2014)
      Sequence version 2 (13 Dec 2001)
      Previous versions | rss
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    Functioni

    Binds to the 23S rRNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L9UniRule annotation
    Gene namesi
    Name:rplIUniRule annotation
    Ordered Locus Names:HP_0514
    OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
    Taxonomic identifieri85962 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000000429: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 14914950S ribosomal protein L9PRO_0000176642Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-3673N.
    IntActiP56035. 4 interactions.
    MINTiMINT-178039.
    STRINGi85962.HP0514.

    Structurei

    3D structure databases

    ProteinModelPortaliP56035.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L9P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0359.
    KOiK02939.
    OMAiNKLGQMG.
    OrthoDBiEOG6D8BH0.

    Family and domain databases

    Gene3Di3.10.430.100. 1 hit.
    3.40.5.10. 1 hit.
    HAMAPiMF_00503. Ribosomal_L9.
    InterProiIPR000244. Ribosomal_L9.
    IPR009027. Ribosomal_L9/RNase_H1_N.
    IPR020594. Ribosomal_L9_bac/chp.
    IPR020069. Ribosomal_L9_C.
    IPR020070. Ribosomal_L9_N.
    [Graphical view]
    PANTHERiPTHR21368. PTHR21368. 1 hit.
    PfamiPF03948. Ribosomal_L9_C. 1 hit.
    PF01281. Ribosomal_L9_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF55653. SSF55653. 1 hit.
    SSF55658. SSF55658. 1 hit.
    TIGRFAMsiTIGR00158. L9. 1 hit.
    PROSITEiPS00651. RIBOSOMAL_L9. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P56035-1 [UniParc]FASTAAdd to Basket

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    MKVLLLEDVK NLGKAGEVCE VKDGYGNNFL IANQKAKLAT NEVINKYKAE    50
    VKKKAEKEAL EKAQKLQMVE TLQTITLTIH KKVGANGSLF GAITKEEITE 100
    RLKEQHASLN LDKKDIELKH PIKSTGIYEI EVKLGSGVVG VFKIDVVAE 149
    Length:149
    Mass (Da):16,460
    Last modified:December 13, 2001 - v2
    Checksum:iE9B40FEA264F1C95
    GO

    Sequence cautioni

    The sequence AAD07582.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD07582.1. Different initiation.
    PIRiB64584.
    RefSeqiNP_207311.1. NC_000915.1.
    YP_006934435.1. NC_018939.1.

    Genome annotation databases

    EnsemblBacteriaiAAD07582; AAD07582; HP_0514.
    GeneIDi13869703.
    899264.
    KEGGiheo:C694_02645.
    hpy:HP0514.
    PATRICi20592305. VBIHelPyl33062_0541.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD07582.1 . Different initiation.
    PIRi B64584.
    RefSeqi NP_207311.1. NC_000915.1.
    YP_006934435.1. NC_018939.1.

    3D structure databases

    ProteinModelPortali P56035.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-3673N.
    IntActi P56035. 4 interactions.
    MINTi MINT-178039.
    STRINGi 85962.HP0514.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAD07582 ; AAD07582 ; HP_0514 .
    GeneIDi 13869703.
    899264.
    KEGGi heo:C694_02645.
    hpy:HP0514.
    PATRICi 20592305. VBIHelPyl33062_0541.

    Phylogenomic databases

    eggNOGi COG0359.
    KOi K02939.
    OMAi NKLGQMG.
    OrthoDBi EOG6D8BH0.

    Family and domain databases

    Gene3Di 3.10.430.100. 1 hit.
    3.40.5.10. 1 hit.
    HAMAPi MF_00503. Ribosomal_L9.
    InterProi IPR000244. Ribosomal_L9.
    IPR009027. Ribosomal_L9/RNase_H1_N.
    IPR020594. Ribosomal_L9_bac/chp.
    IPR020069. Ribosomal_L9_C.
    IPR020070. Ribosomal_L9_N.
    [Graphical view ]
    PANTHERi PTHR21368. PTHR21368. 1 hit.
    Pfami PF03948. Ribosomal_L9_C. 1 hit.
    PF01281. Ribosomal_L9_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55653. SSF55653. 1 hit.
    SSF55658. SSF55658. 1 hit.
    TIGRFAMsi TIGR00158. L9. 1 hit.
    PROSITEi PS00651. RIBOSOMAL_L9. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700392 / 26695.

    Entry informationi

    Entry nameiRL9_HELPY
    AccessioniPrimary (citable) accession number: P56035
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: December 13, 2001
    Last modified: October 1, 2014
    This is version 84 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Helicobacter pylori
      Helicobacter pylori (strain 26695): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3