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Protein

50S ribosomal protein L9

Gene

rplI

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds to the 23S rRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L9UniRule annotation
Gene namesi
Name:rplIUniRule annotation
Ordered Locus Names:HP_0514
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000429 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14914950S ribosomal protein L9PRO_0000176642Add
BLAST

Interactioni

Protein-protein interaction databases

DIPiDIP-3673N.
IntActiP56035. 4 interactions.
MINTiMINT-178039.
STRINGi85962.HP0514.

Structurei

3D structure databases

ProteinModelPortaliP56035.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L9P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0359.
KOiK02939.
OMAiNFLIPQR.
OrthoDBiEOG6D8BH0.

Family and domain databases

Gene3Di3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPiMF_00503. Ribosomal_L9.
InterProiIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERiPTHR21368. PTHR21368. 1 hit.
PfamiPF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMiSSF55653. SSF55653. 1 hit.
SSF55658. SSF55658. 1 hit.
TIGRFAMsiTIGR00158. L9. 1 hit.
PROSITEiPS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P56035-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVLLLEDVK NLGKAGEVCE VKDGYGNNFL IANQKAKLAT NEVINKYKAE
60 70 80 90 100
VKKKAEKEAL EKAQKLQMVE TLQTITLTIH KKVGANGSLF GAITKEEITE
110 120 130 140
RLKEQHASLN LDKKDIELKH PIKSTGIYEI EVKLGSGVVG VFKIDVVAE
Length:149
Mass (Da):16,460
Last modified:December 13, 2001 - v2
Checksum:iE9B40FEA264F1C95
GO

Sequence cautioni

The sequence AAD07582.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07582.1. Different initiation.
PIRiB64584.
RefSeqiNP_207311.1. NC_000915.1.
WP_000978736.1. NC_000915.1.
WP_001862443.1. NC_018939.1.
YP_006934435.1. NC_018939.1.

Genome annotation databases

EnsemblBacteriaiAAD07582; AAD07582; HP_0514.
GeneIDi899264.
KEGGiheo:C694_02645.
hpy:HP0514.
PATRICi20592305. VBIHelPyl33062_0541.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000511 Genomic DNA. Translation: AAD07582.1. Different initiation.
PIRiB64584.
RefSeqiNP_207311.1. NC_000915.1.
WP_000978736.1. NC_000915.1.
WP_001862443.1. NC_018939.1.
YP_006934435.1. NC_018939.1.

3D structure databases

ProteinModelPortaliP56035.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-3673N.
IntActiP56035. 4 interactions.
MINTiMINT-178039.
STRINGi85962.HP0514.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD07582; AAD07582; HP_0514.
GeneIDi899264.
KEGGiheo:C694_02645.
hpy:HP0514.
PATRICi20592305. VBIHelPyl33062_0541.

Phylogenomic databases

eggNOGiCOG0359.
KOiK02939.
OMAiNFLIPQR.
OrthoDBiEOG6D8BH0.

Family and domain databases

Gene3Di3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPiMF_00503. Ribosomal_L9.
InterProiIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERiPTHR21368. PTHR21368. 1 hit.
PfamiPF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMiSSF55653. SSF55653. 1 hit.
SSF55658. SSF55658. 1 hit.
TIGRFAMsiTIGR00158. L9. 1 hit.
PROSITEiPS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700392 / 26695.

Entry informationi

Entry nameiRL9_HELPY
AccessioniPrimary (citable) accession number: P56035
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 13, 2001
Last modified: May 27, 2015
This is version 90 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.