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P56027

- RS20_HELPY

UniProt

P56027 - RS20_HELPY

Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds directly to 16S ribosomal RNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciHPY:HP0076-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S20UniRule annotation
    Gene namesi
    Name:rpsTUniRule annotation
    Ordered Locus Names:HP_0076
    OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
    Taxonomic identifieri85962 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000000429: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 898930S ribosomal protein S20PRO_0000167971Add
    BLAST

    Proteomic databases

    PRIDEiP56027.

    Interactioni

    Protein-protein interaction databases

    STRINGi85962.HP0076.

    Structurei

    3D structure databases

    ProteinModelPortaliP56027.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S20P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0268.
    KOiK02968.
    OMAiFEPEIMR.
    OrthoDBiEOG6HMXNQ.

    Family and domain databases

    Gene3Di1.20.58.110. 1 hit.
    HAMAPiMF_00500. Ribosomal_S20.
    InterProiIPR002583. Ribosomal_S20.
    [Graphical view]
    PfamiPF01649. Ribosomal_S20p. 1 hit.
    [Graphical view]
    ProDomiPD004231. Ribosomal_S20. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF46992. SSF46992. 1 hit.
    TIGRFAMsiTIGR00029. S20. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P56027-1 [UniParc]FASTAAdd to Basket

    « Hide

    MANHKSAEKR IRQTIKRTER NRFYKTKIKN IIKAVREAVA VNDVAKAQER   50
    LKIANKELHK FVSKGILKKN TASRKVSRLN ASVKKIALA 89
    Length:89
    Mass (Da):10,196
    Last modified:November 1, 1997 - v1
    Checksum:iFD2DA520B39FEA36
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD07147.1.
    PIRiD64529.
    RefSeqiNP_206876.1. NC_000915.1.
    YP_006933998.1. NC_018939.1.

    Genome annotation databases

    EnsemblBacteriaiAAD07147; AAD07147; HP_0076.
    GeneIDi13869253.
    898977.
    KEGGiheo:C694_00370.
    hpy:HP0076.
    PATRICi20591357. VBIHelPyl33062_0079.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE000511 Genomic DNA. Translation: AAD07147.1 .
    PIRi D64529.
    RefSeqi NP_206876.1. NC_000915.1.
    YP_006933998.1. NC_018939.1.

    3D structure databases

    ProteinModelPortali P56027.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 85962.HP0076.

    Proteomic databases

    PRIDEi P56027.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAD07147 ; AAD07147 ; HP_0076 .
    GeneIDi 13869253.
    898977.
    KEGGi heo:C694_00370.
    hpy:HP0076.
    PATRICi 20591357. VBIHelPyl33062_0079.

    Phylogenomic databases

    eggNOGi COG0268.
    KOi K02968.
    OMAi FEPEIMR.
    OrthoDBi EOG6HMXNQ.

    Enzyme and pathway databases

    BioCyci HPY:HP0076-MONOMER.

    Family and domain databases

    Gene3Di 1.20.58.110. 1 hit.
    HAMAPi MF_00500. Ribosomal_S20.
    InterProi IPR002583. Ribosomal_S20.
    [Graphical view ]
    Pfami PF01649. Ribosomal_S20p. 1 hit.
    [Graphical view ]
    ProDomi PD004231. Ribosomal_S20. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF46992. SSF46992. 1 hit.
    TIGRFAMsi TIGR00029. S20. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700392 / 26695.

    Entry informationi

    Entry nameiRS20_HELPY
    AccessioniPrimary (citable) accession number: P56027
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Helicobacter pylori
      Helicobacter pylori (strain 26695): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3