Reviewed, UniProtKB/Swiss-Prot P56027 (RS20_HELPY)

Names and origin

Protein names

Recommended name:
    30S ribosomal protein S20

Gene names

Name:	rpsT
Ordered Locus Names:	HP_0076

Organism

Helicobacter pylori (Campylobacter pylori) [Complete proteome] [HAMAP]

Taxonomic identifier

210 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	89 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity.
Sequence similarities	Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 89	89	30S ribosomal protein S20 HAMAP MF_00500		PRO_0000167971

Sequences

	Sequence		Length	Mass (Da)
	P56027-1 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: FD2DA520B39FEA36	FASTA	89	10,196
	10 20 30 40 50 60 MANHKSAEKR IRQTIKRTER NRFYKTKIKN IIKAVREAVA VNDVAKAQER LKIANKELHK 70 80 FVSKGILKKN TASRKVSRLN ASVKKIALA

References

[1]

"The complete genome sequence of the gastric pathogen Helicobacter pylori." Tomb J.-F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D., Ketchum K.A., Klenk H.-P., Gill S.R., Dougherty B.A., Nelson K.E., Quackenbush J., Zhou L., Kirkness E.F., Peterson S.N., Loftus B.J., Richardson D.L., Dodson R.J. , Khalak H.G., Glodek A., McKenney K., FitzGerald L.M., Lee N., Adams M.D., Hickey E.K., Berg D.E., Gocayne J.D., Utterback T.R., Peterson J.D., Kelley J.M., Cotton M.D., Weidman J.F., Fujii C., Bowman C., Watthey L., Wallin E., Hayes W.S., Borodovsky M., Karp P.D., Smith H.O., Fraser C.M., Venter J.C. Nature 388:539-547(1997) [PubMed: 9252185] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700392 / 26695.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE000511 Genomic DNA. Translation: AAD07147.1.
PIR	D64529.
RefSeq	NP_206876.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	898977.
GenomeReviews	Gene locus HP_0076 in contig AE000511_GR.
KEGG	hpy:HP0076.
NMPDR	fig|85962.1.peg.74.
TIGR	HP_0076.
Phylogenomic databases
HOGENOM	P56027.
OMA	RSSAIKT
Family and domain databases
HAMAP	MF_00500. [Tree]
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Gene3D	G3DSA:1.20.58.110. Ribosomal_S20. 1 hit.
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RS20_HELPY

Accession

Primary (citable) accession number: P56027

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	November 24, 2009
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)