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P55726

- Y4YR_RHISN

UniProt

P55726 - Y4YR_RHISN

Protein

Probable translocation protein y4yR

Gene

NGR_a00530

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Could be involved in the secretion of an unknown factor.

    GO - Biological processi

    1. protein secretion Source: InterPro

    Keywords - Biological processi

    Transport

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-5464-MONOMER.
    SFRE394:GBYN-6104-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable translocation protein y4yR
    Gene namesi
    Ordered Locus Names:NGR_a00530
    ORF Names:y4yR
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 697697Probable translocation protein y4yRPRO_0000190035Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a00530.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei20 – 4021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei42 – 6221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei67 – 8721HelicalSequence AnalysisAdd
    BLAST
    Transmembranei107 – 12721HelicalSequence AnalysisAdd
    BLAST
    Transmembranei200 – 22021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei235 – 25521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei293 – 31321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei372 – 39221HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG4789.
    HOGENOMiHOG000254015.
    KOiK03230.
    OMAiLIHIAGR.
    OrthoDBiEOG6RZB0J.

    Family and domain databases

    InterProiIPR025505. FHIPEP_CS.
    IPR001712. T3SS_FHIPEP.
    IPR006302. T3SS_HrcV.
    [Graphical view]
    PfamiPF00771. FHIPEP. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005419. FlhA. 1 hit.
    PRINTSiPR00949. TYPE3IMAPROT.
    TIGRFAMsiTIGR01399. hrcV. 1 hit.
    PROSITEiPS00994. FHIPEP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55726-1 [UniParc]FASTAAdd to Basket

    « Hide

    MANALRRFTE YAPANPDLMV ALMLLLAVSM MVMPIPVMAV DALIGFNMGL    50
    AVLLLMAALY VSTPLDFSSL PGVILLSTVF RLALTVATTR LILAEGEAGS 100
    IIHTFGSFVI SGNIVVGFVI FLVVTMVQFM VLAKGAERVA EVAARFTLDA 150
    LPGKQMAIDA ELRNGHIDAD ESRRRRAALE KESKLYGAMD GAMKFVKGDS 200
    IAGLVVICIN MLGGISIGLL SKGMSFAQVL HHYTLLTIGD ALISQIPALL 250
    LSITAATMVT RVTGASKLNL GEDIANQLTA STRALRLAAC VLVAMGFVPG 300
    FPLPVFFMLA AVFAAASFVK GDVLDADKVD ATTVTPAESQ TPNVAAQPNP 350
    IGVFLAPSLT NAIDQVELRQ HIARISQLVS ADLGIIVPPI PVDVDQQLPE 400
    SQFRIDVEGV PVEQDLINPA QLSLADDLKK IESSGIPFRH DPETHRIWVE 450
    QSHEPALKAA GIRHHSPSEL LAMRVHATLT CHAPRLVGIQ ETRQLLGRME 500
    QEYSDLVKEV LRTTPIPRIA DVLRRLLGEG IPIRNTRLVL EALAEWSERE 550
    QNVALLTEHV RSGMKRQICH RYGRHGVLPA FVMERETEDV VRCAVRETAA 600
    GPYLALEDRQ SEALLSQMRQ VFSSTAPGQT RPIVLTSMDV RRFVRGFLTR 650
    NGIELAVLSY QDLASDFKIQ PVGSIRLPPS NGTSGEPRSI RPSATTG 697
    Length:697
    Mass (Da):75,526
    Last modified:November 1, 1997 - v1
    Checksum:i2A439586CC79BF32
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91957.1.
    RefSeqiNP_444170.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91957; AAB91957; NGR_a00530.
    GeneIDi962238.
    KEGGirhi:NGR_a00530.
    PATRICi32300835. VBIRhiSp122450_0053.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91957.1 .
    RefSeqi NP_444170.1. NC_000914.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a00530.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91957 ; AAB91957 ; NGR_a00530 .
    GeneIDi 962238.
    KEGGi rhi:NGR_a00530.
    PATRICi 32300835. VBIRhiSp122450_0053.

    Phylogenomic databases

    eggNOGi COG4789.
    HOGENOMi HOG000254015.
    KOi K03230.
    OMAi LIHIAGR.
    OrthoDBi EOG6RZB0J.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-5464-MONOMER.
    SFRE394:GBYN-6104-MONOMER.

    Family and domain databases

    InterProi IPR025505. FHIPEP_CS.
    IPR001712. T3SS_FHIPEP.
    IPR006302. T3SS_HrcV.
    [Graphical view ]
    Pfami PF00771. FHIPEP. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005419. FlhA. 1 hit.
    PRINTSi PR00949. TYPE3IMAPROT.
    TIGRFAMsi TIGR01399. hrcV. 1 hit.
    PROSITEi PS00994. FHIPEP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4YR_RHISN
    AccessioniPrimary (citable) accession number: P55726
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3