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P55726

- Y4YR_RHISN

UniProt

P55726 - Y4YR_RHISN

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Protein
Probable translocation protein y4yR
Gene
NGR_a00530, y4yR
Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Could be involved in the secretion of an unknown factor.

GO - Biological processi

  1. protein secretion Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-5464-MONOMER.
SFRE394:GBYN-6104-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable translocation protein y4yR
Gene namesi
Ordered Locus Names:NGR_a00530
ORF Names:y4yR
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei20 – 4021Helical; Reviewed prediction
Add
BLAST
Transmembranei42 – 6221Helical; Reviewed prediction
Add
BLAST
Transmembranei67 – 8721Helical; Reviewed prediction
Add
BLAST
Transmembranei107 – 12721Helical; Reviewed prediction
Add
BLAST
Transmembranei200 – 22021Helical; Reviewed prediction
Add
BLAST
Transmembranei235 – 25521Helical; Reviewed prediction
Add
BLAST
Transmembranei293 – 31321Helical; Reviewed prediction
Add
BLAST
Transmembranei372 – 39221Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 697697Probable translocation protein y4yR
PRO_0000190035Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a00530.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG4789.
HOGENOMiHOG000254015.
KOiK03230.
OMAiLIHIAGR.
OrthoDBiEOG6RZB0J.

Family and domain databases

InterProiIPR025505. FHIPEP_CS.
IPR001712. T3SS_FHIPEP.
IPR006302. T3SS_HrcV.
[Graphical view]
PfamiPF00771. FHIPEP. 1 hit.
[Graphical view]
PIRSFiPIRSF005419. FlhA. 1 hit.
PRINTSiPR00949. TYPE3IMAPROT.
TIGRFAMsiTIGR01399. hrcV. 1 hit.
PROSITEiPS00994. FHIPEP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55726-1 [UniParc]FASTAAdd to Basket

« Hide

MANALRRFTE YAPANPDLMV ALMLLLAVSM MVMPIPVMAV DALIGFNMGL    50
AVLLLMAALY VSTPLDFSSL PGVILLSTVF RLALTVATTR LILAEGEAGS 100
IIHTFGSFVI SGNIVVGFVI FLVVTMVQFM VLAKGAERVA EVAARFTLDA 150
LPGKQMAIDA ELRNGHIDAD ESRRRRAALE KESKLYGAMD GAMKFVKGDS 200
IAGLVVICIN MLGGISIGLL SKGMSFAQVL HHYTLLTIGD ALISQIPALL 250
LSITAATMVT RVTGASKLNL GEDIANQLTA STRALRLAAC VLVAMGFVPG 300
FPLPVFFMLA AVFAAASFVK GDVLDADKVD ATTVTPAESQ TPNVAAQPNP 350
IGVFLAPSLT NAIDQVELRQ HIARISQLVS ADLGIIVPPI PVDVDQQLPE 400
SQFRIDVEGV PVEQDLINPA QLSLADDLKK IESSGIPFRH DPETHRIWVE 450
QSHEPALKAA GIRHHSPSEL LAMRVHATLT CHAPRLVGIQ ETRQLLGRME 500
QEYSDLVKEV LRTTPIPRIA DVLRRLLGEG IPIRNTRLVL EALAEWSERE 550
QNVALLTEHV RSGMKRQICH RYGRHGVLPA FVMERETEDV VRCAVRETAA 600
GPYLALEDRQ SEALLSQMRQ VFSSTAPGQT RPIVLTSMDV RRFVRGFLTR 650
NGIELAVLSY QDLASDFKIQ PVGSIRLPPS NGTSGEPRSI RPSATTG 697
Length:697
Mass (Da):75,526
Last modified:November 1, 1997 - v1
Checksum:i2A439586CC79BF32
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91957.1.
RefSeqiNP_444170.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91957; AAB91957; NGR_a00530.
GeneIDi962238.
KEGGirhi:NGR_a00530.
PATRICi32300835. VBIRhiSp122450_0053.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91957.1 .
RefSeqi NP_444170.1. NC_000914.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a00530.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91957 ; AAB91957 ; NGR_a00530 .
GeneIDi 962238.
KEGGi rhi:NGR_a00530.
PATRICi 32300835. VBIRhiSp122450_0053.

Phylogenomic databases

eggNOGi COG4789.
HOGENOMi HOG000254015.
KOi K03230.
OMAi LIHIAGR.
OrthoDBi EOG6RZB0J.

Enzyme and pathway databases

BioCyci RETL1328306-WGS:GSTH-5464-MONOMER.
SFRE394:GBYN-6104-MONOMER.

Family and domain databases

InterProi IPR025505. FHIPEP_CS.
IPR001712. T3SS_FHIPEP.
IPR006302. T3SS_HrcV.
[Graphical view ]
Pfami PF00771. FHIPEP. 1 hit.
[Graphical view ]
PIRSFi PIRSF005419. FlhA. 1 hit.
PRINTSi PR00949. TYPE3IMAPROT.
TIGRFAMsi TIGR01399. hrcV. 1 hit.
PROSITEi PS00994. FHIPEP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4YR_RHISN
AccessioniPrimary (citable) accession number: P55726
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 9, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi