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Protein

Uncharacterized lipoprotein y4xK

Gene

NGR_a00780

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-5537-MONOMER.
SFRE394:GBYN-6129-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein y4xK
Gene namesi
Ordered Locus Names:NGR_a00780
ORF Names:y4xK
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054 Componenti: Plasmid sym pNGR234a

Subcellular locationi

Cell membrane Curated; Lipid-anchor Curated

GO - Cellular componenti

  1. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818PROSITE-ProRule annotationAdd
BLAST
Chaini19 – 188170Uncharacterized lipoprotein y4xKPRO_0000014171Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi19 – 191N-palmitoyl cysteineCurated
Lipidationi19 – 191S-diacylglycerol cysteineCurated

Keywords - PTMi

Lipoprotein, Palmitate

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a00780.

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG5461.
HOGENOMiHOG000151776.
KOiK02281.
OMAiVHQARQM.
OrthoDBiEOG61VZ8R.

Family and domain databases

InterProiIPR019027. Pilus_biogenesis_CpaD-related.
IPR013361. Pilus_CpaD.
[Graphical view]
PfamiPF09476. Pilus_CpaD. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02522. pilus_cpaD. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P55703-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLRIIAHLL ALTASLAGCT STAPIYVEQP TPIFVRQEST VLKLESFHAS
60 70 80 90 100
EQQRLLAFLW KASRGRRDAL HLVISGSSRL SAEAVHQARQ MGIGASNIHL
110 120 130 140 150
LDQNDRGHLR IEAVVYHALP PICRSLSSQL LNDEFFDQPI GCSTSHNLAV
160 170 180
MINDPRDLLG NRFVKPSDGD RAAIPVTTYR TSTGKGGL
Length:188
Mass (Da):20,593
Last modified:November 1, 1997 - v1
Checksum:i650997A67C20D0C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91934.1.
RefSeqiNP_444147.1. NC_000914.2.
WP_010875119.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91934; AAB91934; NGR_a00780.
GeneIDi962491.
KEGGirhi:NGR_a00780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91934.1.
RefSeqiNP_444147.1. NC_000914.2.
WP_010875119.1. NC_000914.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi394.NGR_a00780.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91934; AAB91934; NGR_a00780.
GeneIDi962491.
KEGGirhi:NGR_a00780.

Phylogenomic databases

eggNOGiCOG5461.
HOGENOMiHOG000151776.
KOiK02281.
OMAiVHQARQM.
OrthoDBiEOG61VZ8R.

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-5537-MONOMER.
SFRE394:GBYN-6129-MONOMER.

Family and domain databases

InterProiIPR019027. Pilus_biogenesis_CpaD-related.
IPR013361. Pilus_CpaD.
[Graphical view]
PfamiPF09476. Pilus_CpaD. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02522. pilus_cpaD. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4XK_RHISN
AccessioniPrimary (citable) accession number: P55703
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: March 4, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.