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P55702 (Y4XJ_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein y4xJ
Gene names
Ordered Locus Names:NGR_a00790
ORF Names:y4xJ
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length423 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the secretion of an unknown compound Potential.

Sequence similarities

Belongs to the GSP D family.

Contains 1 BON domain.

Caution

The proteins from this family have generally a signal sequence and are found in the outer membrane. This protein lacks a recognizable signal sequence.

Ontologies

Keywords
   Biological processTransport
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processprotein secretion

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 423423Uncharacterized protein y4xJ
PRO_0000209447

Regions

Domain75 – 14571BON

Sequences

Sequence LengthMass (Da)Tools
P55702 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: DEB47E59EA071304

FASTA42344,294
        10         20         30         40         50         60 
MPRAAPNSIN ATLNLSSSLG KTVHLPAPAA TIFVADPTIA DYQAPSNRTI FVFGKKFGRT 

        70         80         90        100        110        120 
SLFALDENGE ALAELHVVVT QPIADLRAML RDQVGDYPIH VSYTPRGAIL SGTAPNAEVV 

       130        140        150        160        170        180 
DIAKRVTEQF LGDGAPIVNN IKVAGSLQVN LSVRVAEVSR SGLKALGINL SAFGQFGNFK 

       190        200        210        220        230        240 
VGVLNRGAGL GSATGSGGTA EIGFDNDAVS VGAVLDALAK EHIASVLAEP NLTAMSGETA 

       250        260        270        280        290        300 
SFLAGGEFPI PVLQENGQTS VEFRRFGVSL EFVPTVLDNN LINIHVKPEV SELSLQGAVQ 

       310        320        330        340        350        360 
VNGIAVPAVS TRRADTVVEL ASGQSFVIGG LIRRNVNNDI SAFPWLGRIP ILGALFRSSS 

       370        380        390        400        410        420 
FQKEESELVI LVTPYIVRPG SNPNQMSAPT DRMAPALGTP PRARAAISTD APSVKGDLGF 


IIE 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91933.1.
RefSeqNP_444146.1. NC_000914.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a00790.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91933; AAB91933; NGR_a00790.
GeneID962497.
KEGGrhi:NGR_a00790.
PATRIC32300867. VBIRhiSp122450_0069.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4964.
HOGENOMHOG000259656.
KOK02280.
OMAAEPNISM.
OrthoDBEOG6VHZ71.
ProtClustDBCLSK506570.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6130-MONOMER.

Family and domain databases

InterProIPR007055. BON_dom.
IPR001775. GspD/PilQ.
IPR004846. T2SS/T3SS.
[Graphical view]
PfamPF04972. BON. 1 hit.
PF00263. Secretin. 1 hit.
[Graphical view]
PRINTSPR00811. BCTERIALGSPD.
PROSITEPS50914. BON. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4XJ_RHISN
AccessionPrimary (citable) accession number: P55702
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 13, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names