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Protein

Putative exopolysaccharide production repressor protein y4xQ

Gene

NGR_a00830

Organism
Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Could be involved in the inhibition of exopolysaccharide synthesis (EPS) and nodulation ability (nod).

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Nodulation

Names & Taxonomyi

Protein namesi
Recommended name:
Putative exopolysaccharide production repressor protein y4xQ
Gene namesi
Ordered Locus Names:NGR_a00830
ORF Names:y4xQ
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiSinorhizobium fredii (strain NBRC 101917 / NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001054 Componenti: Plasmid sym pNGR234a

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 29HelicalSequence analysisAdd BLAST21
Transmembranei35 – 55HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002009651 – 100Putative exopolysaccharide production repressor protein y4xQAdd BLAST100

Family & Domainsi

Sequence similaritiesi

To Rhizobium exopolysaccharide production repressor protein (ExoX).Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

OrthoDBiPOG091H39EQ.

Family and domain databases

InterProiIPR024239. SyrA.
[Graphical view]
PfamiPF11089. SyrA. 1 hit.
[Graphical view]
ProDomiPD594998. PD594998. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P55698-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFGIFHRIL WLFLCANTLI VYLVTGSISD AVVTTMVGSL LLQLTYFANV
60 70 80 90 100
LFLLWRAHCA RRARQTTGQF HGEEQPGDPR IAGTHGRTDG DPCFEDEDSR
Length:100
Mass (Da):11,231
Last modified:November 1, 1997 - v1
Checksum:i6D0BB183FD7FE8A4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91929.1.
RefSeqiNP_444142.1. NC_000914.2.
WP_010875124.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91929; AAB91929; NGR_a00830.
GeneIDi962504.
KEGGirhi:NGR_a00830.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91929.1.
RefSeqiNP_444142.1. NC_000914.2.
WP_010875124.1. NC_000914.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91929; AAB91929; NGR_a00830.
GeneIDi962504.
KEGGirhi:NGR_a00830.

Phylogenomic databases

OrthoDBiPOG091H39EQ.

Family and domain databases

InterProiIPR024239. SyrA.
[Graphical view]
PfamiPF11089. SyrA. 1 hit.
[Graphical view]
ProDomiPD594998. PD594998. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiY4XQ_SINFN
AccessioniPrimary (citable) accession number: P55698
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 2, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.