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P55698 (Y4XQ_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative exopolysaccharide production repressor protein y4xQ
Gene names
Ordered Locus Names:NGR_a00830
ORF Names:y4xQ
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length100 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Function

Could be involved in the inhibition of exopolysaccharide synthesis (EPS) and nodulation ability (nod).

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

To Rhizobium exopolysaccharide production repressor protein (ExoX).

Ontologies

Keywords
   Biological processNodulation
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processnodulation

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 100100Putative exopolysaccharide production repressor protein y4xQ
PRO_0000200965

Regions

Transmembrane9 – 2921Helical; Potential
Transmembrane35 – 5521Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P55698 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 6D0BB183FD7FE8A4

FASTA10011,231
        10         20         30         40         50         60 
MSFGIFHRIL WLFLCANTLI VYLVTGSISD AVVTTMVGSL LLQLTYFANV LFLLWRAHCA 

        70         80         90        100 
RRARQTTGQF HGEEQPGDPR IAGTHGRTDG DPCFEDEDSR 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91929.1.
RefSeqNP_444142.1. NC_000914.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a00830.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91929; AAB91929; NGR_a00830.
GeneID962504.
KEGGrhi:NGR_a00830.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OrthoDBEOG6TBHR2.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6134-MONOMER.

Family and domain databases

InterProIPR024239. SyrA.
[Graphical view]
PfamPF11089. SyrA. 1 hit.
[Graphical view]
ProDomPD594998. PD594998. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameY4XQ_RHISN
AccessionPrimary (citable) accession number: P55698
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names