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P55670

- Y4UD_RHISN

UniProt

P55670 - Y4UD_RHISN

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Protein
UPF0262 protein y4uD
Gene
NGR_a01360, y4uD
Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-6458-MONOMER.
SFRE394:GBYN-6187-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0262 protein y4uD
Gene namesi
Ordered Locus Names:NGR_a01360
ORF Names:y4uD
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 165165UPF0262 protein y4uDUniRule annotation
PRO_0000220333Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a01360.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0262 family.

Phylogenomic databases

eggNOGiCOG5328.
HOGENOMiHOG000251919.
OMAiMRIRAID.
OrthoDBiEOG6DC6M8.

Family and domain databases

HAMAPiMF_00678. UPF0262.
InterProiIPR008321. UCP032146.
[Graphical view]
PfamiPF06793. UPF0262. 1 hit.
[Graphical view]
PIRSFiPIRSF032146. UCP032146. 1 hit.

Sequencei

Sequence statusi: Complete.

P55670-1 [UniParc]FASTAAdd to Basket

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MTGAEFRLCD VALDCSFKTR DQRVEREQAL AVLDLLEAST FVPVGHHGGP    50
YRLKISMAAG RLVFHIADDK GAHIVSHHLS LAPFRRLLND YSRTCEGYYE 100
AMCRSNLERL QAIDMGRRGI HDEAAELLRE RLSAKVDIDK DTARRLFTLI 150
YALLARNSGH QILLN 165
Length:165
Mass (Da):18,677
Last modified:November 1, 1997 - v1
Checksum:i904038CE491D1696
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z68203 Genomic DNA. No translation available.
U00090 Genomic DNA. Translation: AAB91876.1.
RefSeqiNP_444089.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91876; AAB91876; NGR_a01360.
GeneIDi962160.
KEGGirhi:NGR_a01360.
PATRICi32300971. VBIRhiSp122450_0121.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z68203 Genomic DNA. No translation available.
U00090 Genomic DNA. Translation: AAB91876.1 .
RefSeqi NP_444089.1. NC_000914.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a01360.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91876 ; AAB91876 ; NGR_a01360 .
GeneIDi 962160.
KEGGi rhi:NGR_a01360.
PATRICi 32300971. VBIRhiSp122450_0121.

Phylogenomic databases

eggNOGi COG5328.
HOGENOMi HOG000251919.
OMAi MRIRAID.
OrthoDBi EOG6DC6M8.

Enzyme and pathway databases

BioCyci RETL1328306-WGS:GSTH-6458-MONOMER.
SFRE394:GBYN-6187-MONOMER.

Family and domain databases

HAMAPi MF_00678. UPF0262.
InterProi IPR008321. UCP032146.
[Graphical view ]
Pfami PF06793. UPF0262. 1 hit.
[Graphical view ]
PIRSFi PIRSF032146. UCP032146. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequencing the 500-kb GC-rich symbiotic replicon of Rhizobium sp. NGR234 using dye terminators and a thermostable 'sequenase': a beginning."
    Freiberg C., Perret X., Broughton W.J., Rosenthal A.
    Genome Res. 6:590-600(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4UD_RHISN
AccessioniPrimary (citable) accession number: P55670
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 9, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

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