P55656 (Y4SO_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized peptidase y4sO
EC=3.4.21.-

Gene names

Ordered Locus Names:	NGR_a01580
ORF Names:	y4sO

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	705 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the peptidase S9A family.

Ontologies

Keywords
Molecular function	Hydrolase Protease Serine protease
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological_process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	serine-type endopeptidase activity Inferred from electronic annotation. Source: InterPro serine-type exopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 705	705	Uncharacterized peptidase y4sO		PRO_0000122407
Sites
	Active site	554	1	Charge relay system By similarity
	Active site	676	1	Charge relay system By similarity

Sequences

	Sequence		Length	Mass (Da)
	P55656 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: EA4985F696A89880	FASTA	705	79,768
	10 20 30 40 50 60 MENKSLQPPL PRSERRIRVL HNDVTIDSYG WLRDREDPDV LAYLEAENHY ADEVTSYVAE 70 80 90 100 110 120 LKADLIAEIE KRDSCDGAPP PFQVGFFFYF QKSQSGLLHS AWWRRPVTGG PEELVFDPNT 130 140 150 160 170 180 LPGAEVFYSL GALEPSDDGR YIAFSFDLIG NERYELRVRD MTNGREIWRD PSRAGRLVWA 190 200 210 220 230 240 ADNRTLFFTR ERADRRQHDR VVRLDVETGR SEVVFEEVNE RLALVVRRSG SGAYLFIDVI 250 260 270 280 290 300 ITSDMSSRIQ RAAAEVWCLP AERPTDMWRR ILARELGHEI YAEHWGNEFL FRVNDTGPNL 310 320 330 340 350 360 RLVRTAIDDT SPSRWQEVVP HRAGITLEEI HVLEEHVIVL EREGIQPRLV AHHRNGRVGP 370 380 390 400 410 420 SIVPVEHSCT VTVGLSAGGS YSCARHPYRV SALTYKICSF VTPDIFIQHD LLTDKSKVLY 430 440 450 460 470 480 RTLVSGFEPE LYEARVVMAK AEDGVEVPIS IVARRDRGED GPVLLNVYGC YGAQSLPAFF 490 500 510 520 530 540 GWPSSMTARL SLLDRGVAFG IVHVRGGGEL GRAWHEAATR DQKRLTHTDL IAAAECLVEH 550 560 570 580 590 600 RFASRDGIVI EGRSAGGGTV LAAAVLRPDL FRAVLAEVPL ADIIDTELDF TLPYALRETA 610 620 630 640 650 660 EYGDPHLAND YQYLRSYDPY YNLTPDRRYP PTYIDAALHD SQVLYYQPAR YVAQRRSKAV 670 680 690 700 DRDPDLIFRT RMIGGHMGVS HGPGVAEEAA FRMAWILHRL GQSGR

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91854.1.
RefSeq	NP_444067.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55656.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB91854; AAB91854; NGR_a01580.
GeneID	962226.
KEGG	rhi:NGR_a01580.
PATRIC	32301019. VBIRhiSp122450_0145.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1770.
HOGENOM	HOG000249811.
OMA	GRYAVAH.
ProtClustDB	CLSK506527.
Enzyme and pathway databases
BioCyc	SFRE394:GBYN-6209-MONOMER.
Family and domain databases
Gene3D	2.130.10.120. 1 hit.
InterPro	IPR023302. Pept_S9A_oligopept_N. IPR001375. Peptidase_S9. IPR002470. Peptidase_S9A. IPR004106. Peptidase_S9A_B_C_N. [Graphical view]
PANTHER	PTHR11757. PTHR11757. 1 hit.
Pfam	PF00326. Peptidase_S9. 1 hit. PF02897. Peptidase_S9_N. 1 hit. [Graphical view]
PRINTS	PR00862. PROLIGOPTASE.
SUPFAM	SSF50993. Peptidase_S9A_N. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y4SO_RHISN

Accession

Primary (citable) accession number: P55656

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 29, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program