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P55656 (Y4SO_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified December 11, 2013. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized peptidase y4sO

EC=3.4.21.-
Gene names
Ordered Locus Names:NGR_a01580
ORF Names:y4sO
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length705 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the peptidase S9A family.

Ontologies

Keywords
   Molecular functionHydrolase
Protease
Serine protease
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processproteolysis

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionserine-type endopeptidase activity

Inferred from electronic annotation. Source: InterPro

serine-type exopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 705705Uncharacterized peptidase y4sO
PRO_0000122407

Sites

Active site5541Charge relay system By similarity
Active site6761Charge relay system By similarity

Sequences

Sequence LengthMass (Da)Tools
P55656 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: EA4985F696A89880

FASTA70579,768
        10         20         30         40         50         60 
MENKSLQPPL PRSERRIRVL HNDVTIDSYG WLRDREDPDV LAYLEAENHY ADEVTSYVAE 

        70         80         90        100        110        120 
LKADLIAEIE KRDSCDGAPP PFQVGFFFYF QKSQSGLLHS AWWRRPVTGG PEELVFDPNT 

       130        140        150        160        170        180 
LPGAEVFYSL GALEPSDDGR YIAFSFDLIG NERYELRVRD MTNGREIWRD PSRAGRLVWA 

       190        200        210        220        230        240 
ADNRTLFFTR ERADRRQHDR VVRLDVETGR SEVVFEEVNE RLALVVRRSG SGAYLFIDVI 

       250        260        270        280        290        300 
ITSDMSSRIQ RAAAEVWCLP AERPTDMWRR ILARELGHEI YAEHWGNEFL FRVNDTGPNL 

       310        320        330        340        350        360 
RLVRTAIDDT SPSRWQEVVP HRAGITLEEI HVLEEHVIVL EREGIQPRLV AHHRNGRVGP 

       370        380        390        400        410        420 
SIVPVEHSCT VTVGLSAGGS YSCARHPYRV SALTYKICSF VTPDIFIQHD LLTDKSKVLY 

       430        440        450        460        470        480 
RTLVSGFEPE LYEARVVMAK AEDGVEVPIS IVARRDRGED GPVLLNVYGC YGAQSLPAFF 

       490        500        510        520        530        540 
GWPSSMTARL SLLDRGVAFG IVHVRGGGEL GRAWHEAATR DQKRLTHTDL IAAAECLVEH 

       550        560        570        580        590        600 
RFASRDGIVI EGRSAGGGTV LAAAVLRPDL FRAVLAEVPL ADIIDTELDF TLPYALRETA 

       610        620        630        640        650        660 
EYGDPHLAND YQYLRSYDPY YNLTPDRRYP PTYIDAALHD SQVLYYQPAR YVAQRRSKAV 

       670        680        690        700 
DRDPDLIFRT RMIGGHMGVS HGPGVAEEAA FRMAWILHRL GQSGR 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91854.1.
RefSeqNP_444067.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55656.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91854; AAB91854; NGR_a01580.
GeneID962226.
KEGGrhi:NGR_a01580.
PATRIC32301019. VBIRhiSp122450_0145.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1770.
HOGENOMHOG000249811.
OMARYSNINT.
OrthoDBEOG6DVJMH.
ProtClustDBCLSK506527.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6209-MONOMER.

Family and domain databases

Gene3D2.130.10.120. 1 hit.
InterProIPR023302. Pept_S9A_N.
IPR001375. Peptidase_S9.
IPR002470. Peptidase_S9A.
[Graphical view]
PANTHERPTHR11757. PTHR11757. 1 hit.
PfamPF00326. Peptidase_S9. 1 hit.
PF02897. Peptidase_S9_N. 1 hit.
[Graphical view]
PRINTSPR00862. PROLIGOPTASE.
ProtoNetSearch...

Entry information

Entry nameY4SO_RHISN
AccessionPrimary (citable) accession number: P55656
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: December 11, 2013
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Peptidase families

Classification of peptidase families and list of entries

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names