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P55640

- Y4RG_RHISN

UniProt

P55640 - Y4RG_RHISN

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Protein

Uncharacterized protein y4rG

Gene

NGR_a01800

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. transposase activity Source: InterPro

GO - Biological processi

  1. transposition, DNA-mediated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6231-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein y4rG
Gene namesi
Ordered Locus Names:NGR_a01800
ORF Names:y4rG
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 135135Uncharacterized protein y4rGPRO_0000200941Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a01800.

Structurei

3D structure databases

ProteinModelPortaliP55640.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the transposase 8 family.Curated

Phylogenomic databases

eggNOGiCOG2963.
HOGENOMiHOG000266650.
OMAiPMSDSVN.
OrthoDBiEOG6K13WH.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR002514. Transposase_8.
IPR010921. Trp_repressor/repl_initiator.
[Graphical view]
PfamiPF01527. HTH_Tnp_1. 1 hit.
[Graphical view]
SUPFAMiSSF48295. SSF48295. 1 hit.

Sequencei

Sequence statusi: Complete.

P55640-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSHAEKPMSD SVNHHHHRTF EVLTAEPVRS RRKPRHWSDE EKAQLVAEAL
60 70 80 90 100
SPGANVSAIA RSQGLDPSQL YAWRRKALSS GMVAPLTEGA PAPVKFTRFE
110 120 130
AVGSSMVEIV VGDIVVRAGA DVDPDHLAKI LRVVR
Length:135
Mass (Da):14,779
Last modified:November 1, 1997 - v1
Checksum:i21B7B02416117C17
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91832.1.
RefSeqiNP_444045.1. NC_000914.2.
WP_010875214.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91832; AAB91832; NGR_a01800.
GeneIDi962417.
KEGGirhi:NGR_a01800.
PATRICi32301085. VBIRhiSp122450_0178.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91832.1 .
RefSeqi NP_444045.1. NC_000914.2.
WP_010875214.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55640.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a01800.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91832 ; AAB91832 ; NGR_a01800 .
GeneIDi 962417.
KEGGi rhi:NGR_a01800.
PATRICi 32301085. VBIRhiSp122450_0178.

Phylogenomic databases

eggNOGi COG2963.
HOGENOMi HOG000266650.
OMAi PMSDSVN.
OrthoDBi EOG6K13WH.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6231-MONOMER.

Family and domain databases

Gene3Di 1.10.10.60. 1 hit.
InterProi IPR009057. Homeodomain-like.
IPR002514. Transposase_8.
IPR010921. Trp_repressor/repl_initiator.
[Graphical view ]
Pfami PF01527. HTH_Tnp_1. 1 hit.
[Graphical view ]
SUPFAMi SSF48295. SSF48295. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4RG_RHISN
AccessioniPrimary (citable) accession number: P55640
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 1, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3