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P55640

- Y4RG_RHISN

UniProt

P55640 - Y4RG_RHISN

Protein

Uncharacterized protein y4rG

Gene

NGR_a01800

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: InterPro
    2. transposase activity Source: InterPro

    GO - Biological processi

    1. transposition, DNA-mediated Source: InterPro

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6231-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein y4rG
    Gene namesi
    Ordered Locus Names:NGR_a01800
    ORF Names:y4rG
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 135135Uncharacterized protein y4rGPRO_0000200941Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a01800.

    Structurei

    3D structure databases

    ProteinModelPortaliP55640.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the transposase 8 family.Curated

    Phylogenomic databases

    eggNOGiCOG2963.
    HOGENOMiHOG000266650.
    OMAiPMSDSVN.
    OrthoDBiEOG6K13WH.

    Family and domain databases

    Gene3Di1.10.10.60. 1 hit.
    InterProiIPR009057. Homeodomain-like.
    IPR002514. Transposase_8.
    IPR010921. Trp_repressor/repl_initiator.
    [Graphical view]
    PfamiPF01527. HTH_Tnp_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF48295. SSF48295. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P55640-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSHAEKPMSD SVNHHHHRTF EVLTAEPVRS RRKPRHWSDE EKAQLVAEAL    50
    SPGANVSAIA RSQGLDPSQL YAWRRKALSS GMVAPLTEGA PAPVKFTRFE 100
    AVGSSMVEIV VGDIVVRAGA DVDPDHLAKI LRVVR 135
    Length:135
    Mass (Da):14,779
    Last modified:November 1, 1997 - v1
    Checksum:i21B7B02416117C17
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91832.1.
    RefSeqiNP_444045.1. NC_000914.2.
    WP_010875214.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91832; AAB91832; NGR_a01800.
    GeneIDi962417.
    KEGGirhi:NGR_a01800.
    PATRICi32301085. VBIRhiSp122450_0178.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91832.1 .
    RefSeqi NP_444045.1. NC_000914.2.
    WP_010875214.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55640.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a01800.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91832 ; AAB91832 ; NGR_a01800 .
    GeneIDi 962417.
    KEGGi rhi:NGR_a01800.
    PATRICi 32301085. VBIRhiSp122450_0178.

    Phylogenomic databases

    eggNOGi COG2963.
    HOGENOMi HOG000266650.
    OMAi PMSDSVN.
    OrthoDBi EOG6K13WH.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6231-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.60. 1 hit.
    InterProi IPR009057. Homeodomain-like.
    IPR002514. Transposase_8.
    IPR010921. Trp_repressor/repl_initiator.
    [Graphical view ]
    Pfami PF01527. HTH_Tnp_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48295. SSF48295. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4RG_RHISN
    AccessioniPrimary (citable) accession number: P55640
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3