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P55626 (Y4QE_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative transposase y4qE
Gene names
Ordered Locus Names:NGR_a01930
ORF Names:y4qE
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length390 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the transposase IS1111A/IS1328/IS1533 family.

Ontologies

Keywords
   Biological processDNA recombination
Transposition
   LigandDNA-binding
   Technical termComplete proteome
Plasmid
Transposable element
Gene Ontology (GO)
   Biological_processtransposition, DNA-mediated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

transposase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 390390Putative transposase y4qE
PRO_0000075456

Sequences

Sequence LengthMass (Da)Tools
P55626 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 327A7028ADF92CAA

FASTA39043,830
        10         20         30         40         50         60 
MSFFGSEVAR PRLFFRGLLG QAGPILITGG RAVADYREAF VGIDVAKLKN AIAVAESGRN 

        70         80         90        100        110        120 
GEVRYWGEVE ASDAGIRRAI KQITAKFEHV YFCYEAGPTG YGLYRLIRSL GHECIVVAPS 

       130        140        150        160        170        180 
LIPRKPGDRV KTNRRDAISL ARLLRAGELT AVWVPDEDHE AMRDLVRART SAVETLRTHR 

       190        200        210        220        230        240 
QQVNAFMLKH GRIYPGKRSW TMRYLRWLQE QHFDHPAHQI ALQEMVETVI AEFVPHWSLA 

       250        260        270        280        290        300 
AVVCALRALR GVDLIAAVTF ATEVGDAGRF ESPRQLMGYL GLVPGERSTG ETTKRIGITK 

       310        320        330        340        350        360 
AGNSRVRTLL VECAWTYRYP PRIGKRKLYR LEEVSSSVRE IAWKAQTRLT ARYRMLSARG 

       370        380        390 
KKSTVVCTAV ARELAGFMWA IAREARQTTS 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91829.1.
RefSeqNP_444032.1. NC_000914.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a01930.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91829; AAB91829; NGR_a01930.
GeneID962406.
KEGGrhi:NGR_a01930.
PATRIC32301117. VBIRhiSp122450_0194.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3547.
HOGENOMHOG000226184.
OMAERSTGET.
OrthoDBEOG6P337F.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6244-MONOMER.

Family and domain databases

InterProIPR003346. Transposase_20.
IPR002525. Transposase_N.
[Graphical view]
PfamPF01548. DEDD_Tnp_IS110. 1 hit.
PF02371. Transposase_20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4QE_RHISN
AccessionPrimary (citable) accession number: P55626
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names