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P55626

- Y4QE_RHISN

UniProt

P55626 - Y4QE_RHISN

Protein

Putative transposase y4qE

Gene

NGR_a01930

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. transposase activity Source: InterPro

    GO - Biological processi

    1. transposition, DNA-mediated Source: InterPro

    Keywords - Biological processi

    DNA recombination, Transposition

    Keywords - Ligandi

    DNA-binding

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6244-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative transposase y4qE
    Gene namesi
    Ordered Locus Names:NGR_a01930
    ORF Names:y4qE
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 390390Putative transposase y4qEPRO_0000075456Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a01930.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG3547.
    HOGENOMiHOG000226184.
    OMAiERSTGET.
    OrthoDBiEOG6P337F.

    Family and domain databases

    InterProiIPR003346. Transposase_20.
    IPR002525. Transposase_N.
    [Graphical view]
    PfamiPF01548. DEDD_Tnp_IS110. 1 hit.
    PF02371. Transposase_20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55626-1 [UniParc]FASTAAdd to Basket

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    MSFFGSEVAR PRLFFRGLLG QAGPILITGG RAVADYREAF VGIDVAKLKN    50
    AIAVAESGRN GEVRYWGEVE ASDAGIRRAI KQITAKFEHV YFCYEAGPTG 100
    YGLYRLIRSL GHECIVVAPS LIPRKPGDRV KTNRRDAISL ARLLRAGELT 150
    AVWVPDEDHE AMRDLVRART SAVETLRTHR QQVNAFMLKH GRIYPGKRSW 200
    TMRYLRWLQE QHFDHPAHQI ALQEMVETVI AEFVPHWSLA AVVCALRALR 250
    GVDLIAAVTF ATEVGDAGRF ESPRQLMGYL GLVPGERSTG ETTKRIGITK 300
    AGNSRVRTLL VECAWTYRYP PRIGKRKLYR LEEVSSSVRE IAWKAQTRLT 350
    ARYRMLSARG KKSTVVCTAV ARELAGFMWA IAREARQTTS 390
    Length:390
    Mass (Da):43,830
    Last modified:November 1, 1997 - v1
    Checksum:i327A7028ADF92CAA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91829.1.
    RefSeqiNP_444032.1. NC_000914.2.
    WP_010875227.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91829; AAB91829; NGR_a01930.
    GeneIDi962406.
    KEGGirhi:NGR_a01930.
    PATRICi32301117. VBIRhiSp122450_0194.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91829.1 .
    RefSeqi NP_444032.1. NC_000914.2.
    WP_010875227.1. NC_000914.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a01930.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91829 ; AAB91829 ; NGR_a01930 .
    GeneIDi 962406.
    KEGGi rhi:NGR_a01930.
    PATRICi 32301117. VBIRhiSp122450_0194.

    Phylogenomic databases

    eggNOGi COG3547.
    HOGENOMi HOG000226184.
    OMAi ERSTGET.
    OrthoDBi EOG6P337F.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6244-MONOMER.

    Family and domain databases

    InterProi IPR003346. Transposase_20.
    IPR002525. Transposase_N.
    [Graphical view ]
    Pfami PF01548. DEDD_Tnp_IS110. 1 hit.
    PF02371. Transposase_20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4QE_RHISN
    AccessioniPrimary (citable) accession number: P55626
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome, Transposable element

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3