Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P55626

- Y4QE_RHISN

UniProt

P55626 - Y4QE_RHISN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Putative transposase y4qE

Gene

NGR_a01930

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. transposase activity Source: InterPro

GO - Biological processi

  1. transposition, DNA-mediated Source: InterPro
Complete GO annotation...

Keywords - Biological processi

DNA recombination, Transposition

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6244-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative transposase y4qE
Gene namesi
Ordered Locus Names:NGR_a01930
ORF Names:y4qE
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 390390Putative transposase y4qEPRO_0000075456Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a01930.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG3547.
HOGENOMiHOG000226184.
OMAiERSTGET.
OrthoDBiEOG6P337F.

Family and domain databases

InterProiIPR003346. Transposase_20.
IPR002525. Transposase_N.
[Graphical view]
PfamiPF01548. DEDD_Tnp_IS110. 1 hit.
PF02371. Transposase_20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55626-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSFFGSEVAR PRLFFRGLLG QAGPILITGG RAVADYREAF VGIDVAKLKN
60 70 80 90 100
AIAVAESGRN GEVRYWGEVE ASDAGIRRAI KQITAKFEHV YFCYEAGPTG
110 120 130 140 150
YGLYRLIRSL GHECIVVAPS LIPRKPGDRV KTNRRDAISL ARLLRAGELT
160 170 180 190 200
AVWVPDEDHE AMRDLVRART SAVETLRTHR QQVNAFMLKH GRIYPGKRSW
210 220 230 240 250
TMRYLRWLQE QHFDHPAHQI ALQEMVETVI AEFVPHWSLA AVVCALRALR
260 270 280 290 300
GVDLIAAVTF ATEVGDAGRF ESPRQLMGYL GLVPGERSTG ETTKRIGITK
310 320 330 340 350
AGNSRVRTLL VECAWTYRYP PRIGKRKLYR LEEVSSSVRE IAWKAQTRLT
360 370 380 390
ARYRMLSARG KKSTVVCTAV ARELAGFMWA IAREARQTTS
Length:390
Mass (Da):43,830
Last modified:November 1, 1997 - v1
Checksum:i327A7028ADF92CAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91829.1.
RefSeqiNP_444032.1. NC_000914.2.
WP_010875227.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91829; AAB91829; NGR_a01930.
GeneIDi962406.
KEGGirhi:NGR_a01930.
PATRICi32301117. VBIRhiSp122450_0194.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91829.1 .
RefSeqi NP_444032.1. NC_000914.2.
WP_010875227.1. NC_000914.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a01930.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91829 ; AAB91829 ; NGR_a01930 .
GeneIDi 962406.
KEGGi rhi:NGR_a01930.
PATRICi 32301117. VBIRhiSp122450_0194.

Phylogenomic databases

eggNOGi COG3547.
HOGENOMi HOG000226184.
OMAi ERSTGET.
OrthoDBi EOG6P337F.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6244-MONOMER.

Family and domain databases

InterProi IPR003346. Transposase_20.
IPR002525. Transposase_N.
[Graphical view ]
Pfami PF01548. DEDD_Tnp_IS110. 1 hit.
PF02371. Transposase_20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4QE_RHISN
AccessioniPrimary (citable) accession number: P55626
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 1, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome, Transposable element

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3