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Protein

Probable transposase for insertion sequence element ISRM3-like

Gene

NGR_a01970

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Required for the transposition of the insertion element.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

DNA recombination, Transposition

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6248-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable transposase for insertion sequence element ISRM3-like
Gene namesi
Ordered Locus Names:NGR_a01970
ORF Names:y4pO
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054 Componenti: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 400400Probable transposase for insertion sequence element ISRM3-likePRO_0000211357Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the transposase mutator family.Curated

Phylogenomic databases

eggNOGiCOG3328.
HOGENOMiHOG000103025.
KOiK07493.
OMAiMYDVEIS.
OrthoDBiEOG6XQ3MH.

Family and domain databases

InterProiIPR001207. Transposase_mutator.
[Graphical view]
PfamiPF00872. Transposase_mut. 1 hit.
[Graphical view]
PROSITEiPS01007. TRANSPOSASE_MUTATOR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55620-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIEKELLDQ LLAGRDPSEV FGKDGLLDDL KKALSERILN AELDEHLDVE
60 70 80 90 100
RSEGTAANRR NGSSKKTVLT GTSKMTLTIP RDRAGTFDPK LIARYQRRFP
110 120 130 140 150
DFDDKIISMY ARGMTVREIQ GHLEDIYGID VSPDLISAVT DQVLEAVGEW
160 170 180 190 200
QNRPLELCYP LVFFDAIRVK IRDEGFVRNK AVYVALAVLA DGTKEILGLW
210 220 230 240 250
IEQTEGAKFW LRVMNELKSR GCQDILIAVV DGLKGFPDAI TAVFPQTIVQ
260 270 280 290 300
TCIVHLIRHS LEFVSYKDRK PVVPALRAIY RARDAEAGLK ALEAFEEGYW
310 320 330 340 350
GQKYPAISQS WRRNWEHVVP FFAFPEGVRR IIYTTNAIEA LNSKLRRAVR
360 370 380 390 400
SRGHFPGDEA AMKLLYLVLN NAAEQWKRAP REWVEAKTQF AVIFGERFFN
Length:400
Mass (Da):45,532
Last modified:November 1, 1997 - v1
Checksum:i7D2A25689FA33955
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91825.1.
RefSeqiNP_444028.1. NC_000914.2.
WP_010875231.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91825; AAB91825; NGR_a01970.
GeneIDi962402.
KEGGirhi:NGR_a01970.
PATRICi32301129. VBIRhiSp122450_0200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91825.1.
RefSeqiNP_444028.1. NC_000914.2.
WP_010875231.1. NC_000914.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91825; AAB91825; NGR_a01970.
GeneIDi962402.
KEGGirhi:NGR_a01970.
PATRICi32301129. VBIRhiSp122450_0200.

Phylogenomic databases

eggNOGiCOG3328.
HOGENOMiHOG000103025.
KOiK07493.
OMAiMYDVEIS.
OrthoDBiEOG6XQ3MH.

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6248-MONOMER.

Family and domain databases

InterProiIPR001207. Transposase_mutator.
[Graphical view]
PfamiPF00872. Transposase_mut. 1 hit.
[Graphical view]
PROSITEiPS01007. TRANSPOSASE_MUTATOR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4PO_RHISN
AccessioniPrimary (citable) accession number: P55620
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 22, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome, Transposable element

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.