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P55620 (Y4PO_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable transposase for insertion sequence element ISRM3-like
Gene names
Ordered Locus Names:NGR_a01970
ORF Names:y4pO
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length400 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for the transposition of the insertion element By similarity.

Sequence similarities

Belongs to the transposase mutator family.

Ontologies

Keywords
   Biological processDNA recombination
Transposition
   LigandDNA-binding
   Technical termComplete proteome
Plasmid
Transposable element
Gene Ontology (GO)
   Biological_processtransposition, DNA-mediated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

transposase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 400400Probable transposase for insertion sequence element ISRM3-like
PRO_0000211357

Sequences

Sequence LengthMass (Da)Tools
P55620 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 7D2A25689FA33955

FASTA40045,532
        10         20         30         40         50         60 
MAIEKELLDQ LLAGRDPSEV FGKDGLLDDL KKALSERILN AELDEHLDVE RSEGTAANRR 

        70         80         90        100        110        120 
NGSSKKTVLT GTSKMTLTIP RDRAGTFDPK LIARYQRRFP DFDDKIISMY ARGMTVREIQ 

       130        140        150        160        170        180 
GHLEDIYGID VSPDLISAVT DQVLEAVGEW QNRPLELCYP LVFFDAIRVK IRDEGFVRNK 

       190        200        210        220        230        240 
AVYVALAVLA DGTKEILGLW IEQTEGAKFW LRVMNELKSR GCQDILIAVV DGLKGFPDAI 

       250        260        270        280        290        300 
TAVFPQTIVQ TCIVHLIRHS LEFVSYKDRK PVVPALRAIY RARDAEAGLK ALEAFEEGYW 

       310        320        330        340        350        360 
GQKYPAISQS WRRNWEHVVP FFAFPEGVRR IIYTTNAIEA LNSKLRRAVR SRGHFPGDEA 

       370        380        390        400 
AMKLLYLVLN NAAEQWKRAP REWVEAKTQF AVIFGERFFN 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91825.1.
RefSeqNP_444028.1. NC_000914.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91825; AAB91825; NGR_a01970.
GeneID962402.
KEGGrhi:NGR_a01970.
PATRIC32301129. VBIRhiSp122450_0200.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3328.
HOGENOMHOG000103025.
OMALNASKKW.
OrthoDBEOG6XQ3MH.
ProtClustDBCLSK805939.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6248-MONOMER.

Family and domain databases

InterProIPR001207. Transposase_mutator.
[Graphical view]
PfamPF00872. Transposase_mut. 1 hit.
[Graphical view]
PROSITEPS01007. TRANSPOSASE_MUTATOR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4PO_RHISN
AccessionPrimary (citable) accession number: P55620
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 13, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names