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P55613 (Y4PD_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative MucR family transcriptional regulatory protein y4pD
Gene names
Ordered Locus Names:NGR_a02080
ORF Names:y4pD
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length171 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Domain

Lacks the C2H3-type zinc-finger found in all members of this family.

Sequence similarities

Belongs to the ros/MucR family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 171171Putative MucR family transcriptional regulatory protein y4pD
PRO_0000168176

Sequences

Sequence LengthMass (Da)Tools
P55613 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 85B6F1B963E4C948

FASTA17118,946
        10         20         30         40         50         60 
MNQPRLASGQ RNLELTSRVV SAYLSRNIVP AADLASLIQQ TYLSLCSTSQ ADKAEEAAVE 

        70         80         90        100        110        120 
EQRPAVPIKK SVTADFIICL EDGKKFKSLK RHLMAKYGLT PQQYREKWGL PADYPMVASS 

       130        140        150        160        170 
YAQKRSELAR ALGLGKKRTA PELGSGLVNH SQKMTEAAMQ IAEKKVWAHR S 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91814.1.
RefSeqNP_444017.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55613.
SMRP55613. Positions 57-140.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a02080.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91814; AAB91814; NGR_a02080.
GeneID962213.
KEGGrhi:NGR_a02080.
PATRIC32301161. VBIRhiSp122450_0216.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4957.
HOGENOMHOG000007948.
OMAETIMDAF.
OrthoDBEOG615VMK.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6259-MONOMER.

Family and domain databases

InterProIPR008807. ROS_MUCR.
[Graphical view]
PfamPF05443. ROS_MUCR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4PD_RHISN
AccessionPrimary (citable) accession number: P55613
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names