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P55613

- Y4PD_RHISN

UniProt

P55613 - Y4PD_RHISN

Protein

Putative MucR family transcriptional regulatory protein y4pD

Gene

NGR_a02080

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. zinc ion binding Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6259-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative MucR family transcriptional regulatory protein y4pD
    Gene namesi
    Ordered Locus Names:NGR_a02080
    ORF Names:y4pD
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 171171Putative MucR family transcriptional regulatory protein y4pDPRO_0000168176Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a02080.

    Structurei

    3D structure databases

    ProteinModelPortaliP55613.
    SMRiP55613. Positions 57-140.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domaini

    Lacks the C2H3-type zinc-finger found in all members of this family.

    Sequence similaritiesi

    Belongs to the ros/MucR family.Curated

    Phylogenomic databases

    eggNOGiCOG4957.
    HOGENOMiHOG000007948.
    OMAiETIMDAF.
    OrthoDBiEOG615VMK.

    Family and domain databases

    InterProiIPR008807. ROS_MUCR.
    [Graphical view]
    PfamiPF05443. ROS_MUCR. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55613-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNQPRLASGQ RNLELTSRVV SAYLSRNIVP AADLASLIQQ TYLSLCSTSQ    50
    ADKAEEAAVE EQRPAVPIKK SVTADFIICL EDGKKFKSLK RHLMAKYGLT 100
    PQQYREKWGL PADYPMVASS YAQKRSELAR ALGLGKKRTA PELGSGLVNH 150
    SQKMTEAAMQ IAEKKVWAHR S 171
    Length:171
    Mass (Da):18,946
    Last modified:November 1, 1997 - v1
    Checksum:i85B6F1B963E4C948
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91814.1.
    RefSeqiNP_444017.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91814; AAB91814; NGR_a02080.
    GeneIDi962213.
    KEGGirhi:NGR_a02080.
    PATRICi32301161. VBIRhiSp122450_0216.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91814.1 .
    RefSeqi NP_444017.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55613.
    SMRi P55613. Positions 57-140.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a02080.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91814 ; AAB91814 ; NGR_a02080 .
    GeneIDi 962213.
    KEGGi rhi:NGR_a02080.
    PATRICi 32301161. VBIRhiSp122450_0216.

    Phylogenomic databases

    eggNOGi COG4957.
    HOGENOMi HOG000007948.
    OMAi ETIMDAF.
    OrthoDBi EOG615VMK.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6259-MONOMER.

    Family and domain databases

    InterProi IPR008807. ROS_MUCR.
    [Graphical view ]
    Pfami PF05443. ROS_MUCR. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4PD_RHISN
    AccessioniPrimary (citable) accession number: P55613
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3