Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P55613

- Y4PD_RHISN

UniProt

P55613 - Y4PD_RHISN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Putative MucR family transcriptional regulatory protein y4pD

Gene

NGR_a02080

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6259-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative MucR family transcriptional regulatory protein y4pD
Gene namesi
Ordered Locus Names:NGR_a02080
ORF Names:y4pD
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 171171Putative MucR family transcriptional regulatory protein y4pDPRO_0000168176Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a02080.

Structurei

3D structure databases

ProteinModelPortaliP55613.
SMRiP55613. Positions 57-140.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domaini

Lacks the C2H3-type zinc-finger found in all members of this family.

Sequence similaritiesi

Belongs to the ros/MucR family.Curated

Phylogenomic databases

eggNOGiCOG4957.
HOGENOMiHOG000007948.
OMAiETIMDAF.
OrthoDBiEOG615VMK.

Family and domain databases

InterProiIPR008807. ROS_MUCR.
[Graphical view]
PfamiPF05443. ROS_MUCR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55613-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNQPRLASGQ RNLELTSRVV SAYLSRNIVP AADLASLIQQ TYLSLCSTSQ
60 70 80 90 100
ADKAEEAAVE EQRPAVPIKK SVTADFIICL EDGKKFKSLK RHLMAKYGLT
110 120 130 140 150
PQQYREKWGL PADYPMVASS YAQKRSELAR ALGLGKKRTA PELGSGLVNH
160 170
SQKMTEAAMQ IAEKKVWAHR S
Length:171
Mass (Da):18,946
Last modified:November 1, 1997 - v1
Checksum:i85B6F1B963E4C948
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91814.1.
RefSeqiNP_444017.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91814; AAB91814; NGR_a02080.
GeneIDi962213.
KEGGirhi:NGR_a02080.
PATRICi32301161. VBIRhiSp122450_0216.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91814.1 .
RefSeqi NP_444017.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55613.
SMRi P55613. Positions 57-140.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a02080.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91814 ; AAB91814 ; NGR_a02080 .
GeneIDi 962213.
KEGGi rhi:NGR_a02080.
PATRICi 32301161. VBIRhiSp122450_0216.

Phylogenomic databases

eggNOGi COG4957.
HOGENOMi HOG000007948.
OMAi ETIMDAF.
OrthoDBi EOG615VMK.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6259-MONOMER.

Family and domain databases

InterProi IPR008807. ROS_MUCR.
[Graphical view ]
Pfami PF05443. ROS_MUCR. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4PD_RHISN
AccessioniPrimary (citable) accession number: P55613
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 1, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3