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Protein

UPF0261 protein y4oU

Gene

NGR_a02150

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6266-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0261 protein y4oUUniRule annotation
Gene namesi
Ordered Locus Names:NGR_a02150
ORF Names:y4oU
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054 Componenti: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 402402UPF0261 protein y4oUPRO_0000220215Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0261 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG5441.
HOGENOMiHOG000017578.
OMAiHVRQTDR.
OrthoDBiEOG6R87F6.

Family and domain databases

HAMAPiMF_00677. UPF0261.
InterProiIPR008322. UPF0261.
[Graphical view]
PfamiPF06792. UPF0261. 1 hit.
[Graphical view]
PIRSFiPIRSF033271. UCP033271. 1 hit.

Sequencei

Sequence statusi: Complete.

P55606-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTVYVVGTC DTKGGELRYL RDLIRQAGCD AVLVDVSVSE FHSQAADVDV
60 70 80 90 100
QPSEVARFHP NPPKPEDLKD RGKAVAAMAQ ALVEFIRSRP DVDGIIGAGG
110 120 130 140 150
TGGTALIAPA LRALPIGTPK VLVSTVASGN VAPYVGPTDI SMMYSVTDVS
160 170 180 190 200
GLNRISRVVL ANAAHSVAGM VLNKVSAAKD ERPAIGLTMF GVTTPCVQAV
210 220 230 240 250
TRALEADFDC LVFHATGTGG QSFEKLADSA LLVGGIDVST TEVCDYLVGG
260 270 280 290 300
VFPCTADRFG AFARTRLPYV GSCGALDMVN FGAMDTVPSR FRSRRLHVHN
310 320 330 340 350
PQVTLMRTTP EECNRIGEWI AERLNLCEGT VRFLIPELGV SAIDAPGQPF
360 370 380 390 400
HDPEADSALF AALERTLRRT TKRQLIRVPL HINDPQFAEL LVTNFKEALR

EH
Length:402
Mass (Da):43,097
Last modified:November 1, 1997 - v1
Checksum:iEBACAC30F6DC752C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91807.1.
RefSeqiNP_444010.1. NC_000914.2.
WP_010875242.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91807; AAB91807; NGR_a02150.
GeneIDi962579.
KEGGirhi:NGR_a02150.
PATRICi32301181. VBIRhiSp122450_0226.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91807.1.
RefSeqiNP_444010.1. NC_000914.2.
WP_010875242.1. NC_000914.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91807; AAB91807; NGR_a02150.
GeneIDi962579.
KEGGirhi:NGR_a02150.
PATRICi32301181. VBIRhiSp122450_0226.

Phylogenomic databases

eggNOGiCOG5441.
HOGENOMiHOG000017578.
OMAiHVRQTDR.
OrthoDBiEOG6R87F6.

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6266-MONOMER.

Family and domain databases

HAMAPiMF_00677. UPF0261.
InterProiIPR008322. UPF0261.
[Graphical view]
PfamiPF06792. UPF0261. 1 hit.
[Graphical view]
PIRSFiPIRSF033271. UCP033271. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4OU_RHISN
AccessioniPrimary (citable) accession number: P55606
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 22, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.