Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P55606 (Y4OU_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0261 protein y4oU
Gene names
Ordered Locus Names:NGR_a02150
ORF Names:y4oU
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length402 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0261 family.

Ontologies

Keywords
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 402402UPF0261 protein y4oU HAMAP-Rule MF_00677
PRO_0000220215

Sequences

Sequence LengthMass (Da)Tools
P55606 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: EBACAC30F6DC752C

FASTA40243,097
        10         20         30         40         50         60 
MNTVYVVGTC DTKGGELRYL RDLIRQAGCD AVLVDVSVSE FHSQAADVDV QPSEVARFHP 

        70         80         90        100        110        120 
NPPKPEDLKD RGKAVAAMAQ ALVEFIRSRP DVDGIIGAGG TGGTALIAPA LRALPIGTPK 

       130        140        150        160        170        180 
VLVSTVASGN VAPYVGPTDI SMMYSVTDVS GLNRISRVVL ANAAHSVAGM VLNKVSAAKD 

       190        200        210        220        230        240 
ERPAIGLTMF GVTTPCVQAV TRALEADFDC LVFHATGTGG QSFEKLADSA LLVGGIDVST 

       250        260        270        280        290        300 
TEVCDYLVGG VFPCTADRFG AFARTRLPYV GSCGALDMVN FGAMDTVPSR FRSRRLHVHN 

       310        320        330        340        350        360 
PQVTLMRTTP EECNRIGEWI AERLNLCEGT VRFLIPELGV SAIDAPGQPF HDPEADSALF 

       370        380        390        400 
AALERTLRRT TKRQLIRVPL HINDPQFAEL LVTNFKEALR EH 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91807.1.
RefSeqNP_444010.1. NC_000914.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a02150.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91807; AAB91807; NGR_a02150.
GeneID962579.
KEGGrhi:NGR_a02150.
PATRIC32301181. VBIRhiSp122450_0226.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5441.
HOGENOMHOG000017578.
OMALPYVGSC.
OrthoDBEOG6R87F6.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6266-MONOMER.

Family and domain databases

HAMAPMF_00677. UPF0261.
InterProIPR008322. UPF0261.
[Graphical view]
PfamPF06792. UPF0261. 1 hit.
[Graphical view]
PIRSFPIRSF033271. UCP033271. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY4OU_RHISN
AccessionPrimary (citable) accession number: P55606
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names