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P55584

- Y4NL_RHISN

UniProt

P55584 - Y4NL_RHISN

Protein

Uncharacterized protein y4nL

Gene

NGR_a02300

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Putative nucleotide sugar epimerase/dehydrogenase.

    Cofactori

    NAD or NADP.

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. coenzyme binding Source: InterPro

    GO - Biological processi

    1. cellular metabolic process Source: InterPro

    Keywords - Ligandi

    NAD

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6281-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein y4nL
    Gene namesi
    Ordered Locus Names:NGR_a02300
    ORF Names:y4nL
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 356356Uncharacterized protein y4nLPRO_0000200920Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a02300.

    Structurei

    3D structure databases

    ProteinModelPortaliP55584.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0451.
    HOGENOMiHOG000152050.
    OMAiSEMNKTI.
    OrthoDBiEOG6KDKS7.

    Family and domain databases

    Gene3Di3.40.50.720. 1 hit.
    InterProiIPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view]
    PfamiPF01370. Epimerase. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55584-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQEITPITLN APLVLLTGAA GWLGGRVAAA LTTGLPDAGL LANGSFRVRA    50
    LVPKGEDISE LRKQGMEIAT GDLREMQSVR AFVAGAEGAV LIHMAGIIHP 100
    KNVAQFEAIN TQGTINLVTA AQKAGVRRAV VMSSNSPVGF NPHSDHRFTE 150
    ESPYDPHAGY GRSKMLMERA LRAEVAAGST MEIVIVRAPW FYGPNQPSRQ 200
    TLFFKMVKEG KFPIIGSGRN RRSMGYTDNL AQGILLAAVH ERAAGDIFWL 250
    ADETPYTMNE IIEVVGMVLH EDFGMTVKPN PFRLPDIVGG AATILDATLQ 300
    YAGIYHQKIH VLSEMNKTIA CDITKARKVL GYAPKIALRE GMQRSVDWCV 350
    KNGQSF 356
    Length:356
    Mass (Da):38,669
    Last modified:November 1, 1997 - v1
    Checksum:i90A45A8A669D0CBF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91791.1.
    RefSeqiNP_443995.1. NC_000914.2.
    WP_010875257.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91791; AAB91791; NGR_a02300.
    GeneIDi962248.
    KEGGirhi:NGR_a02300.
    PATRICi32301215. VBIRhiSp122450_0243.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91791.1 .
    RefSeqi NP_443995.1. NC_000914.2.
    WP_010875257.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55584.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a02300.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91791 ; AAB91791 ; NGR_a02300 .
    GeneIDi 962248.
    KEGGi rhi:NGR_a02300.
    PATRICi 32301215. VBIRhiSp122450_0243.

    Phylogenomic databases

    eggNOGi COG0451.
    HOGENOMi HOG000152050.
    OMAi SEMNKTI.
    OrthoDBi EOG6KDKS7.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6281-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 1 hit.
    InterProi IPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view ]
    Pfami PF01370. Epimerase. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4NL_RHISN
    AccessioniPrimary (citable) accession number: P55584
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3