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P55584

- Y4NL_RHISN

UniProt

P55584 - Y4NL_RHISN

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Protein

Uncharacterized protein y4nL

Gene

NGR_a02300

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Putative nucleotide sugar epimerase/dehydrogenase.

Cofactori

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. coenzyme binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

NAD

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6281-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein y4nL
Gene namesi
Ordered Locus Names:NGR_a02300
ORF Names:y4nL
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 356356Uncharacterized protein y4nLPRO_0000200920Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a02300.

Structurei

3D structure databases

ProteinModelPortaliP55584.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0451.
HOGENOMiHOG000152050.
OMAiSEMNKTI.
OrthoDBiEOG6KDKS7.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR001509. Epimerase_deHydtase_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF01370. Epimerase. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55584-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQEITPITLN APLVLLTGAA GWLGGRVAAA LTTGLPDAGL LANGSFRVRA
60 70 80 90 100
LVPKGEDISE LRKQGMEIAT GDLREMQSVR AFVAGAEGAV LIHMAGIIHP
110 120 130 140 150
KNVAQFEAIN TQGTINLVTA AQKAGVRRAV VMSSNSPVGF NPHSDHRFTE
160 170 180 190 200
ESPYDPHAGY GRSKMLMERA LRAEVAAGST MEIVIVRAPW FYGPNQPSRQ
210 220 230 240 250
TLFFKMVKEG KFPIIGSGRN RRSMGYTDNL AQGILLAAVH ERAAGDIFWL
260 270 280 290 300
ADETPYTMNE IIEVVGMVLH EDFGMTVKPN PFRLPDIVGG AATILDATLQ
310 320 330 340 350
YAGIYHQKIH VLSEMNKTIA CDITKARKVL GYAPKIALRE GMQRSVDWCV

KNGQSF
Length:356
Mass (Da):38,669
Last modified:November 1, 1997 - v1
Checksum:i90A45A8A669D0CBF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91791.1.
RefSeqiNP_443995.1. NC_000914.2.
WP_010875257.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91791; AAB91791; NGR_a02300.
GeneIDi962248.
KEGGirhi:NGR_a02300.
PATRICi32301215. VBIRhiSp122450_0243.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91791.1 .
RefSeqi NP_443995.1. NC_000914.2.
WP_010875257.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55584.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a02300.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91791 ; AAB91791 ; NGR_a02300 .
GeneIDi 962248.
KEGGi rhi:NGR_a02300.
PATRICi 32301215. VBIRhiSp122450_0243.

Phylogenomic databases

eggNOGi COG0451.
HOGENOMi HOG000152050.
OMAi SEMNKTI.
OrthoDBi EOG6KDKS7.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6281-MONOMER.

Family and domain databases

Gene3Di 3.40.50.720. 1 hit.
InterProi IPR001509. Epimerase_deHydtase_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view ]
Pfami PF01370. Epimerase. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4NL_RHISN
AccessioniPrimary (citable) accession number: P55584
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 26, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3