P55574 (Y4MO_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative uncharacterized transketolase family protein y4mO

Gene names

Ordered Locus Names:	NGR_a02440
ORF Names:	y4mO

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	279 AA.
Sequence status	Complete.
Protein existence	Uncertain

General annotation (Comments)

Cofactor	Binds 1 thiamine pyrophosphate per subunit By similarity.
Subcellular location	Cell membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the transketolase family.
Caution	Could be the product of a pseudogene. Corresponds to the N-terminal of members of this family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Ligand	Thiamine pyrophosphate
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 279	279	Putative uncharacterized transketolase family protein y4mO		PRO_0000191913
Regions
	Transmembrane	31 – 51	21	Helical; Potential
	Transmembrane	67 – 87	21	Helical; Potential
	Transmembrane	115 – 135	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	P55574 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: FE48B6DC956D5462	FASTA	279	30,743
	10 20 30 40 50 60 MAQIGHNISL PERARRIRRH ALRMGEVQGQ GYIAQALGIA DVLAVAYFHA TTYRPDDPEW 70 80 90 100 110 120 EGRDRFLLSI GHYAIALYAA LIEAKIIPED ELETYGADDS RLPMSGMAAY TPGMEITGGS 130 140 150 160 170 180 LGHGLGIAVG MSLALKRKGS RSFVYNLFSD GELDEGSTWE AAMSAGSYKL DNLIGIVDVN 190 200 210 220 230 240 QMQADGPSLG VLNFEPLGPK FEAFGWYVQR IDGNDIDALV DAFDNARQHR HPQPRIIICD 250 260 270 TKMAKGVPFL EARERNHFLR VEPQEWAEAI RIIDAGVTA

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91778.1.
RefSeq	NP_443981.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55574.
ModBase	Search...
Protein-protein interaction databases
STRING	394.NGR_a02440.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB91778; AAB91778; NGR_a02440.
GeneID	962368.
KEGG	rhi:NGR_a02440.
PATRIC	32301237. VBIRhiSp122450_0254.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3959.
HOGENOM	HOG000243880.
KO	K00615.
OMA	PRIIICD.
ProtClustDB	CLSK864385.
Enzyme and pathway databases
BioCyc	SFRE394:GBYN-6295-MONOMER.
Family and domain databases
InterPro	IPR005474. Transketolase_N. [Graphical view]
Pfam	PF00456. Transketolase_N. 1 hit. [Graphical view]
PROSITE	PS00801. TRANSKETOLASE_1. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4MO_RHISN

Accession

Primary (citable) accession number: P55574

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 29, 2013
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program