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P55573

- Y4MN_RHISN

UniProt

P55573 - Y4MN_RHISN

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Protein

Putative uncharacterized transketolase family protein y4mN

Gene

NGR_a02450

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein uncertaini

Functioni

Cofactori

thiamine diphosphateBy similarityNote: Binds 1 thiamine pyrophosphate per subunit.By similarity

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Thiamine pyrophosphate

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-2411-MONOMER.
RETL1328306-WGS:GSTH-4513-MONOMER.
SFRE394:GBYN-6296-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized transketolase family protein y4mN
Gene namesi
Ordered Locus Names:NGR_a02450
ORF Names:y4mN
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 345345Putative uncharacterized transketolase family protein y4mNPRO_0000191912Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a02450.

Structurei

3D structure databases

ProteinModelPortaliP55573.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the transketolase family.Curated

Phylogenomic databases

eggNOGiCOG3958.
HOGENOMiHOG000243869.
KOiK00615.
OMAiFEQVRNS.
OrthoDBiEOG69GZPF.

Family and domain databases

Gene3Di3.40.50.920. 1 hit.
3.40.50.970. 1 hit.
InterProiIPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
PfamiPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 1 hit.
SSF52922. SSF52922. 1 hit.

Sequencei

Sequence statusi: Complete.

P55573-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRRSKYERPA HLIGNAERPR LTTSAMIASI AGADQPTRPA PFGHALSALA
60 70 80 90 100
EKDDRVVGLS ADLAKYTDLH VFRAAHPDRF YQMGMAEQLL MMSAAGMARE
110 120 130 140 150
GLQPWVTTYA VFASRRAYDF ICLAIAEEML DVKVVCALPG LTTGYGPSHQ
160 170 180 190 200
ATEDIAMFRG MPNLTIIDPC DASEIEQAVP AIAAHEGPVY MRLLRGNVPL
210 220 230 240 250
VLEEYGYRFE LGKAKLLRDG RDTLIISSGL MTMRALEAAE ELRKNGIDAG
260 270 280 290 300
VLHVPTIKPL DEATILAECA RQGRLVVVAE NHTVIGGLGE AVAATLMRSA
310 320 330 340
VRPAAFRQIG LPDAFLEAGA LPTLHDMYGI STTKIVAQIK EWLDE
Length:345
Mass (Da):37,509
Last modified:November 1, 1997 - v1
Checksum:iE6711A19D2D4253D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91777.1.
RefSeqiNP_443980.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91777; AAB91777; NGR_a02450.
GeneIDi962370.
KEGGirhi:NGR_a02450.
PATRICi32301239. VBIRhiSp122450_0255.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91777.1 .
RefSeqi NP_443980.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55573.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a02450.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91777 ; AAB91777 ; NGR_a02450 .
GeneIDi 962370.
KEGGi rhi:NGR_a02450.
PATRICi 32301239. VBIRhiSp122450_0255.

Phylogenomic databases

eggNOGi COG3958.
HOGENOMi HOG000243869.
KOi K00615.
OMAi FEQVRNS.
OrthoDBi EOG69GZPF.

Enzyme and pathway databases

BioCyci RETL1328306-WGS:GSTH-2411-MONOMER.
RETL1328306-WGS:GSTH-4513-MONOMER.
SFRE394:GBYN-6296-MONOMER.

Family and domain databases

Gene3Di 3.40.50.920. 1 hit.
3.40.50.970. 1 hit.
InterProi IPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view ]
Pfami PF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view ]
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 1 hit.
SSF52922. SSF52922. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4MN_RHISN
AccessioniPrimary (citable) accession number: P55573
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 26, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. Corresponds to the C-terminal of members of this family.Curated

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3