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P55573 (Y4MN_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative uncharacterized transketolase family protein y4mN
Gene names
Ordered Locus Names:NGR_a02450
ORF Names:y4mN
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length345 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Cofactor

Binds 1 thiamine pyrophosphate per subunit By similarity.

Sequence similarities

Belongs to the transketolase family.

Caution

Could be the product of a pseudogene. Corresponds to the C-terminal of members of this family.

Ontologies

Keywords
   LigandThiamine pyrophosphate
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 345345Putative uncharacterized transketolase family protein y4mN
PRO_0000191912

Sequences

Sequence LengthMass (Da)Tools
P55573 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: E6711A19D2D4253D

FASTA34537,509
        10         20         30         40         50         60 
MRRSKYERPA HLIGNAERPR LTTSAMIASI AGADQPTRPA PFGHALSALA EKDDRVVGLS 

        70         80         90        100        110        120 
ADLAKYTDLH VFRAAHPDRF YQMGMAEQLL MMSAAGMARE GLQPWVTTYA VFASRRAYDF 

       130        140        150        160        170        180 
ICLAIAEEML DVKVVCALPG LTTGYGPSHQ ATEDIAMFRG MPNLTIIDPC DASEIEQAVP 

       190        200        210        220        230        240 
AIAAHEGPVY MRLLRGNVPL VLEEYGYRFE LGKAKLLRDG RDTLIISSGL MTMRALEAAE 

       250        260        270        280        290        300 
ELRKNGIDAG VLHVPTIKPL DEATILAECA RQGRLVVVAE NHTVIGGLGE AVAATLMRSA 

       310        320        330        340 
VRPAAFRQIG LPDAFLEAGA LPTLHDMYGI STTKIVAQIK EWLDE 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91777.1.
RefSeqNP_443980.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55573.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a02450.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91777; AAB91777; NGR_a02450.
GeneID962370.
KEGGrhi:NGR_a02450.
PATRIC32301239. VBIRhiSp122450_0255.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3958.
HOGENOMHOG000243869.
KOK00615.
OMAPVYVRMP.
OrthoDBEOG69GZPF.
ProtClustDBCLSK2518394.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6296-MONOMER.

Family and domain databases

Gene3D3.40.50.920. 1 hit.
InterProIPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
PfamPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52922. SSF52922. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY4MN_RHISN
AccessionPrimary (citable) accession number: P55573
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: February 19, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names