P55573 (Y4MN_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative uncharacterized transketolase family protein y4mN

Gene names

Ordered Locus Names:	NGR_a02450
ORF Names:	y4mN

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	345 AA.
Sequence status	Complete.
Protein existence	Uncertain

General annotation (Comments)

Cofactor	Binds 1 thiamine pyrophosphate per subunit By similarity.
Sequence similarities	Belongs to the transketolase family.
Caution	Could be the product of a pseudogene. Corresponds to the C-terminal of members of this family.

Ontologies

Keywords
Ligand	Thiamine pyrophosphate
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 345	345	Putative uncharacterized transketolase family protein y4mN		PRO_0000191912

Sequences

	Sequence		Length	Mass (Da)
	P55573 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: E6711A19D2D4253D	FASTA	345	37,509
	10 20 30 40 50 60 MRRSKYERPA HLIGNAERPR LTTSAMIASI AGADQPTRPA PFGHALSALA EKDDRVVGLS 70 80 90 100 110 120 ADLAKYTDLH VFRAAHPDRF YQMGMAEQLL MMSAAGMARE GLQPWVTTYA VFASRRAYDF 130 140 150 160 170 180 ICLAIAEEML DVKVVCALPG LTTGYGPSHQ ATEDIAMFRG MPNLTIIDPC DASEIEQAVP 190 200 210 220 230 240 AIAAHEGPVY MRLLRGNVPL VLEEYGYRFE LGKAKLLRDG RDTLIISSGL MTMRALEAAE 250 260 270 280 290 300 ELRKNGIDAG VLHVPTIKPL DEATILAECA RQGRLVVVAE NHTVIGGLGE AVAATLMRSA 310 320 330 340 VRPAAFRQIG LPDAFLEAGA LPTLHDMYGI STTKIVAQIK EWLDE

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91777.1.
RefSeq	NP_443980.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55573.
ModBase	Search...
Protein-protein interaction databases
STRING	394.NGR_a02450.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB91777; AAB91777; NGR_a02450.
GeneID	962370.
KEGG	rhi:NGR_a02450.
PATRIC	32301239. VBIRhiSp122450_0255.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3958.
HOGENOM	HOG000243869.
KO	K00615.
OMA	IVDPCDA.
ProtClustDB	CLSK2518394.
Family and domain databases
Gene3D	3.40.50.920. 1 hit.
InterPro	IPR009014. Transketo_C/Pyr-ferredox_oxred. IPR015941. Transketolase-like_C. IPR005475. Transketolase-like_Pyr-bd. IPR005476. Transketolase_C. [Graphical view]
Pfam	PF02779. Transket_pyr. 1 hit. PF02780. Transketolase_C. 1 hit. [Graphical view]
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAM	SSF52922. Transketo_C_like. 1 hit.
PROSITE	PS00802. TRANSKETOLASE_2. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4MN_RHISN

Accession

Primary (citable) accession number: P55573

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 1, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program