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P55573

- Y4MN_RHISN

UniProt

P55573 - Y4MN_RHISN

Protein

Putative uncharacterized transketolase family protein y4mN

Gene

NGR_a02450

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein uncertaini
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 thiamine pyrophosphate per subunit.By similarity

    GO - Molecular functioni

    1. catalytic activity Source: InterPro

    Keywords - Ligandi

    Thiamine pyrophosphate

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-2411-MONOMER.
    RETL1328306-WGS:GSTH-4513-MONOMER.
    SFRE394:GBYN-6296-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized transketolase family protein y4mN
    Gene namesi
    Ordered Locus Names:NGR_a02450
    ORF Names:y4mN
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 345345Putative uncharacterized transketolase family protein y4mNPRO_0000191912Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a02450.

    Structurei

    3D structure databases

    ProteinModelPortaliP55573.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the transketolase family.Curated

    Phylogenomic databases

    eggNOGiCOG3958.
    HOGENOMiHOG000243869.
    KOiK00615.
    OMAiFEQVRNS.
    OrthoDBiEOG69GZPF.

    Family and domain databases

    Gene3Di3.40.50.920. 1 hit.
    3.40.50.970. 1 hit.
    InterProiIPR029061. THDP-binding.
    IPR009014. Transketo_C/Pyr-ferredox_oxred.
    IPR005475. Transketolase-like_Pyr-bd.
    IPR005476. Transketolase_C.
    [Graphical view]
    PfamiPF02779. Transket_pyr. 1 hit.
    PF02780. Transketolase_C. 1 hit.
    [Graphical view]
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 1 hit.
    SSF52922. SSF52922. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P55573-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRRSKYERPA HLIGNAERPR LTTSAMIASI AGADQPTRPA PFGHALSALA    50
    EKDDRVVGLS ADLAKYTDLH VFRAAHPDRF YQMGMAEQLL MMSAAGMARE 100
    GLQPWVTTYA VFASRRAYDF ICLAIAEEML DVKVVCALPG LTTGYGPSHQ 150
    ATEDIAMFRG MPNLTIIDPC DASEIEQAVP AIAAHEGPVY MRLLRGNVPL 200
    VLEEYGYRFE LGKAKLLRDG RDTLIISSGL MTMRALEAAE ELRKNGIDAG 250
    VLHVPTIKPL DEATILAECA RQGRLVVVAE NHTVIGGLGE AVAATLMRSA 300
    VRPAAFRQIG LPDAFLEAGA LPTLHDMYGI STTKIVAQIK EWLDE 345
    Length:345
    Mass (Da):37,509
    Last modified:November 1, 1997 - v1
    Checksum:iE6711A19D2D4253D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91777.1.
    RefSeqiNP_443980.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91777; AAB91777; NGR_a02450.
    GeneIDi962370.
    KEGGirhi:NGR_a02450.
    PATRICi32301239. VBIRhiSp122450_0255.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91777.1 .
    RefSeqi NP_443980.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55573.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a02450.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91777 ; AAB91777 ; NGR_a02450 .
    GeneIDi 962370.
    KEGGi rhi:NGR_a02450.
    PATRICi 32301239. VBIRhiSp122450_0255.

    Phylogenomic databases

    eggNOGi COG3958.
    HOGENOMi HOG000243869.
    KOi K00615.
    OMAi FEQVRNS.
    OrthoDBi EOG69GZPF.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-2411-MONOMER.
    RETL1328306-WGS:GSTH-4513-MONOMER.
    SFRE394:GBYN-6296-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.920. 1 hit.
    3.40.50.970. 1 hit.
    InterProi IPR029061. THDP-binding.
    IPR009014. Transketo_C/Pyr-ferredox_oxred.
    IPR005475. Transketolase-like_Pyr-bd.
    IPR005476. Transketolase_C.
    [Graphical view ]
    Pfami PF02779. Transket_pyr. 1 hit.
    PF02780. Transketolase_C. 1 hit.
    [Graphical view ]
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 1 hit.
    SSF52922. SSF52922. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4MN_RHISN
    AccessioniPrimary (citable) accession number: P55573
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Caution

    Could be the product of a pseudogene. Corresponds to the C-terminal of members of this family.Curated

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3