Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P55569

- Y4MJ_RHISN

UniProt

P55569 - Y4MJ_RHISN

Protein

Probable ABC transporter permease protein y4mJ

Gene

NGR_a02490

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar. Probably responsible for the translocation of the substrate across the membrane.

    GO - Molecular functioni

    1. transporter activity Source: InterPro

    GO - Biological processi

    1. carbohydrate transport Source: UniProtKB-KW

    Keywords - Biological processi

    Sugar transport, Transport

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-3242-MONOMER.
    SFRE394:GBYN-6300-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable ABC transporter permease protein y4mJ
    Gene namesi
    Ordered Locus Names:NGR_a02490
    ORF Names:y4mJ
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 333333Probable ABC transporter permease protein y4mJPRO_0000060294Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a02490.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei30 – 5021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei62 – 8221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei84 – 10421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei110 – 13021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei133 – 15321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei175 – 19521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei228 – 24821HelicalSequence AnalysisAdd
    BLAST
    Transmembranei253 – 27321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei274 – 29421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei300 – 32021HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG1172.
    HOGENOMiHOG000212232.
    KOiK10440.
    OMAiQARTITN.
    OrthoDBiEOG61P6T8.

    Family and domain databases

    InterProiIPR001851. ABC_transp_permease.
    [Graphical view]
    PfamiPF02653. BPD_transp_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55569-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTKTIIDQAG ATPGAIRTRE GLVSAYRTEL AIAGAIVLLV LAVGTQVPQA    50
    MSWGNFANIT QAGAPLIIMS LGVLLVVITG GIDLSVGSVF SLTGMVTAQA 100
    MASGLDVSAA LIGLGVGLVF GSINGFLVTV AGLAPFVVTL ITFAVAGSLA 150
    FIVTNGRSMP IGDPDFWLLN SGSLIPGVPN YILFCIVLLV VIEIFLKKMV 200
    AGRWFYAVGS SAAAARLLGI PVKRTQFFAY VASSLLASFS GLLTISYILN 250
    AESTAGSSLM LQAIAAVVIG GASLLGGTGT AVGAVLGALM ITVIQNGVNL 300
    IGINSFWQGS VTGLAILIAV LIDRFSKSRR GAV 333
    Length:333
    Mass (Da):33,907
    Last modified:November 1, 1997 - v1
    Checksum:i88E7E95F48E638C7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91773.1.
    RefSeqiNP_443976.1. NC_000914.2.
    WP_010875274.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91773; AAB91773; NGR_a02490.
    GeneIDi962622.
    KEGGirhi:NGR_a02490.
    PATRICi32301247. VBIRhiSp122450_0259.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91773.1 .
    RefSeqi NP_443976.1. NC_000914.2.
    WP_010875274.1. NC_000914.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a02490.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91773 ; AAB91773 ; NGR_a02490 .
    GeneIDi 962622.
    KEGGi rhi:NGR_a02490.
    PATRICi 32301247. VBIRhiSp122450_0259.

    Phylogenomic databases

    eggNOGi COG1172.
    HOGENOMi HOG000212232.
    KOi K10440.
    OMAi QARTITN.
    OrthoDBi EOG61P6T8.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-3242-MONOMER.
    SFRE394:GBYN-6300-MONOMER.

    Family and domain databases

    InterProi IPR001851. ABC_transp_permease.
    [Graphical view ]
    Pfami PF02653. BPD_transp_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4MJ_RHISN
    AccessioniPrimary (citable) accession number: P55569
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3