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P55568

- Y4MI_RHISN

UniProt

P55568 - Y4MI_RHISN

Protein

Probable ABC transporter periplasmic-binding protein y4mI

Gene

NGR_a02500

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar.

    GO - Biological processi

    1. carbohydrate transport Source: UniProtKB-KW

    Keywords - Biological processi

    Sugar transport, Transport

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-4519-MONOMER.
    SFRE394:GBYN-6301-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable ABC transporter periplasmic-binding protein y4mI
    Gene namesi
    Ordered Locus Names:NGR_a02500
    ORF Names:y4mI
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    Subcellular locationi

    Periplasm Curated

    GO - Cellular componenti

    1. periplasmic space Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Periplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1818Or 26Sequence AnalysisAdd
    BLAST
    Chaini19 – 324306Probable ABC transporter periplasmic-binding protein y4mIPRO_0000031746Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a02500.

    Structurei

    3D structure databases

    ProteinModelPortaliP55568.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1879.
    HOGENOMiHOG000274031.
    KOiK10439.
    OMAiDISYWQW.
    OrthoDBiEOG61P6T8.

    Family and domain databases

    InterProiIPR025997. Peripla_BP.
    IPR028082. Peripla_BP_I.
    [Graphical view]
    PfamiPF13407. Peripla_BP_4. 1 hit.
    [Graphical view]
    SUPFAMiSSF53822. SSF53822. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P55568-1 [UniParc]FASTAAdd to Basket

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    MRKKLNGWLA MAAGAALAAL SSVSHAEDRK TVAYLAPSLD ISYWQWVGFG    50
    VKQKAQELGM DYVEFTSENS PAKQMDNART AVTKGVDAIV IGPVSSTSTP 100
    PLLAYLKSQN IPIAFAGIGP QPGQTDYTSS VTANNYETGK AQGSFVCALA 150
    KERGGNKVGM LSLPQDRENA QKYLKGAQEA FAADGCELVQ MLETRGLTVN 200
    EAVTQANDML TAHPDIKAIY GMYDEAGTGA AKVLETRGLT GKIGIAVADG 250
    SPTTIALLKA TAIQGIFFQE AVGQGIDGTL QVFNALTNAP VEKDLALVMP 300
    LVTADKIDTA EAKAVIARVF PPSN 324
    Length:324
    Mass (Da):34,088
    Last modified:November 1, 1997 - v1
    Checksum:i173BBE8D7ED0C6B0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91772.1.
    RefSeqiNP_443975.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91772; AAB91772; NGR_a02500.
    GeneIDi962570.
    KEGGirhi:NGR_a02500.
    PATRICi32301249. VBIRhiSp122450_0260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91772.1 .
    RefSeqi NP_443975.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55568.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a02500.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91772 ; AAB91772 ; NGR_a02500 .
    GeneIDi 962570.
    KEGGi rhi:NGR_a02500.
    PATRICi 32301249. VBIRhiSp122450_0260.

    Phylogenomic databases

    eggNOGi COG1879.
    HOGENOMi HOG000274031.
    KOi K10439.
    OMAi DISYWQW.
    OrthoDBi EOG61P6T8.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-4519-MONOMER.
    SFRE394:GBYN-6301-MONOMER.

    Family and domain databases

    InterProi IPR025997. Peripla_BP.
    IPR028082. Peripla_BP_I.
    [Graphical view ]
    Pfami PF13407. Peripla_BP_4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53822. SSF53822. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4MI_RHISN
    AccessioniPrimary (citable) accession number: P55568
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 71 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3