P55568 (Y4MI_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable ABC transporter periplasmic-binding protein y4mI

Gene names

Ordered Locus Names:	NGR_a02500
ORF Names:	y4mI

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	324 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar.
Subcellular location	Periplasm Potential.
Sequence similarities	Belongs to the bacterial solute-binding protein 2 family.

Ontologies

Keywords
Biological process	Sugar transport Transport
Cellular component	Periplasm
Domain	Signal
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological_process	carbohydrate transport Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	periplasmic space Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 18	18	Or 26 Potential
	Chain	19 – 324	306	Probable ABC transporter periplasmic-binding protein y4mI		PRO_0000031746

Sequences

	Sequence		Length	Mass (Da)
	P55568 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 173BBE8D7ED0C6B0	FASTA	324	34,088
	10 20 30 40 50 60 MRKKLNGWLA MAAGAALAAL SSVSHAEDRK TVAYLAPSLD ISYWQWVGFG VKQKAQELGM 70 80 90 100 110 120 DYVEFTSENS PAKQMDNART AVTKGVDAIV IGPVSSTSTP PLLAYLKSQN IPIAFAGIGP 130 140 150 160 170 180 QPGQTDYTSS VTANNYETGK AQGSFVCALA KERGGNKVGM LSLPQDRENA QKYLKGAQEA 190 200 210 220 230 240 FAADGCELVQ MLETRGLTVN EAVTQANDML TAHPDIKAIY GMYDEAGTGA AKVLETRGLT 250 260 270 280 290 300 GKIGIAVADG SPTTIALLKA TAIQGIFFQE AVGQGIDGTL QVFNALTNAP VEKDLALVMP 310 320 LVTADKIDTA EAKAVIARVF PPSN

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91772.1.
RefSeq	NP_443975.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55568.
ModBase	Search...
Protein-protein interaction databases
STRING	394.NGR_a02500.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB91772; AAB91772; NGR_a02500.
GeneID	962570.
KEGG	rhi:NGR_a02500.
PATRIC	32301249. VBIRhiSp122450_0260.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1879.
HOGENOM	HOG000274031.
KO	K10439.
OMA	PQDRENA.
ProtClustDB	CLSK784541.
Enzyme and pathway databases
BioCyc	SFRE394:GBYN-6301-MONOMER.
Family and domain databases
InterPro	IPR025997. Peripla_BP. [Graphical view]
Pfam	PF13407. Peripla_BP_4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4MI_RHISN

Accession

Primary (citable) accession number: P55568

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 29, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program