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P55568 (Y4MI_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable ABC transporter periplasmic-binding protein y4mI
Gene names
Ordered Locus Names:NGR_a02500
ORF Names:y4mI
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length324 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar.

Subcellular location

Periplasm Potential.

Sequence similarities

Belongs to the bacterial solute-binding protein 2 family.

Ontologies

Keywords
   Biological processSugar transport
Transport
   Cellular componentPeriplasm
   DomainSignal
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processcarbohydrate transport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentperiplasmic space

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818Or 26 Potential
Chain19 – 324306Probable ABC transporter periplasmic-binding protein y4mI
PRO_0000031746

Sequences

Sequence LengthMass (Da)Tools
P55568 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 173BBE8D7ED0C6B0

FASTA32434,088
        10         20         30         40         50         60 
MRKKLNGWLA MAAGAALAAL SSVSHAEDRK TVAYLAPSLD ISYWQWVGFG VKQKAQELGM 

        70         80         90        100        110        120 
DYVEFTSENS PAKQMDNART AVTKGVDAIV IGPVSSTSTP PLLAYLKSQN IPIAFAGIGP 

       130        140        150        160        170        180 
QPGQTDYTSS VTANNYETGK AQGSFVCALA KERGGNKVGM LSLPQDRENA QKYLKGAQEA 

       190        200        210        220        230        240 
FAADGCELVQ MLETRGLTVN EAVTQANDML TAHPDIKAIY GMYDEAGTGA AKVLETRGLT 

       250        260        270        280        290        300 
GKIGIAVADG SPTTIALLKA TAIQGIFFQE AVGQGIDGTL QVFNALTNAP VEKDLALVMP 

       310        320 
LVTADKIDTA EAKAVIARVF PPSN 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91772.1.
RefSeqNP_443975.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55568.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a02500.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91772; AAB91772; NGR_a02500.
GeneID962570.
KEGGrhi:NGR_a02500.
PATRIC32301249. VBIRhiSp122450_0260.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1879.
HOGENOMHOG000274031.
KOK10439.
OMADISYWQW.
OrthoDBEOG61P6T8.

Enzyme and pathway databases

BioCycRETL1328306-WGS:GSTH-4519-MONOMER.
SFRE394:GBYN-6301-MONOMER.

Family and domain databases

InterProIPR025997. Peripla_BP.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamPF13407. Peripla_BP_4. 1 hit.
[Graphical view]
SUPFAMSSF53822. SSF53822. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY4MI_RHISN
AccessionPrimary (citable) accession number: P55568
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 9, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names