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P55562

- Y4MC_RHISN

UniProt

P55562 - Y4MC_RHISN

Protein

Uncharacterized protein y4mC

Gene

NGR_a02560

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6307-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein y4mC
    Gene namesi
    Ordered Locus Names:NGR_a02560
    ORF Names:y4mC
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2828Sequence AnalysisAdd
    BLAST
    Chaini29 – 237209Uncharacterized protein y4mCPRO_0000014169Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a02560.

    Structurei

    3D structure databases

    ProteinModelPortaliP55562.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiNOG46789.
    HOGENOMiHOG000288334.
    OMAiCEVAETY.
    OrthoDBiEOG6TFCQG.

    Family and domain databases

    Gene3Di3.40.1410.10. 1 hit.
    InterProiIPR028978. Chorismate_lyase_/UTRA_dom.
    [Graphical view]
    SUPFAMiSSF64288. SSF64288. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P55562-1 [UniParc]FASTAAdd to Basket

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    MVFSFSTFNR LVTFTVMAAI VSVRPLTAED LSSQQQWPGT PLSRVEALAV    50
    LQTLNANLLS NASATLTLDR WCEAHRLAPP GSKIVAKHVQ GHDKPANVHI 100
    RKLLHVGPNE PIVYRHVRLA CGDRILSEAD NWYVPARLTA EMNEVLNTTD 150
    ISFGRAVRSL NFTRTNLTAR LLWSPLPEGW DMSAELPVSS SGPLIPPPFL 200
    LEHHAVLKLQ DGTPFSAVVE SYTNNVLDFP APLLYPQ 237
    Length:237
    Mass (Da):26,205
    Last modified:November 1, 1997 - v1
    Checksum:iF5AA67D9EB7BFB5B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91766.1.
    RefSeqiNP_443969.1. NC_000914.2.
    WP_010875281.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91766; AAB91766; NGR_a02560.
    GeneIDi962364.
    KEGGirhi:NGR_a02560.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91766.1 .
    RefSeqi NP_443969.1. NC_000914.2.
    WP_010875281.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55562.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a02560.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91766 ; AAB91766 ; NGR_a02560 .
    GeneIDi 962364.
    KEGGi rhi:NGR_a02560.

    Phylogenomic databases

    eggNOGi NOG46789.
    HOGENOMi HOG000288334.
    OMAi CEVAETY.
    OrthoDBi EOG6TFCQG.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6307-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1410.10. 1 hit.
    InterProi IPR028978. Chorismate_lyase_/UTRA_dom.
    [Graphical view ]
    SUPFAMi SSF64288. SSF64288. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4MC_RHISN
    AccessioniPrimary (citable) accession number: P55562
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names

    External Data

    Dasty 3