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P55515 (Y4JO_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein y4jO
Gene names
Ordered Locus Names:NGR_a03000
ORF Names:y4jO
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length321 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 321321Uncharacterized protein y4jO
PRO_0000200881

Sequences

Sequence LengthMass (Da)Tools
P55515 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 757B6CE4BAAEB3CA

FASTA32136,099
        10         20         30         40         50         60 
MLHAGLVSAP YITVDDTGAR HARDSFHTTQ IGAEHFTAFR TTASKSRLNF LSLLRGSYQD 

        70         80         90        100        110        120 
YVLNDAAFDY LDGRRADPAL VAKIRSHEPR RFCDQVPFLE YLAGKGIDIF DRQAVRVLAE 

       130        140        150        160        170        180 
AGIWGSIRHH GLLGDTVIVS DDAGQFRVGN HALCWVYAER LLQKLMPATP RQVRQVEAVR 

       190        200        210        220        230        240 
DLVWRFYRAL KSVKRKPPPG LAAAFRKRFA RIFSLRTGYE DLDKLLARLS RRKDELLKVL 

       250        260        270        280        290        300 
ERPDIPLHTN ASENDLRSFV TKRKISGGTM SRDGRVARDT MLGLMKTCKK LGLSFWHYLG 

       310        320 
DRLGLDGQAI APLAALVAAK A 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91727.1.
PIRT28642.
RefSeqNP_443925.1. NC_000914.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a03000.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91727; AAB91727; NGR_a03000.
GeneID962629.
KEGGrhi:NGR_a03000.
PATRIC32301357. VBIRhiSp122450_0314.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3436.
HOGENOMHOG000289302.
OMAIRSHEPR.
OrthoDBEOG6G4VRG.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6351-MONOMER.

Family and domain databases

InterProIPR004291. Transposase_25.
[Graphical view]
PfamPF03050. DDE_Tnp_IS66. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4JO_RHISN
AccessionPrimary (citable) accession number: P55515
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names