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P55493

- Y4IJ_RHISN

UniProt

P55493 - Y4IJ_RHISN

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Protein

Uncharacterized protein y4iJ

Gene

NGR_a03230

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. electron carrier activity Source: InterPro
  2. heme binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6374-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein y4iJ
Gene namesi
Ordered Locus Names:NGR_a03230
ORF Names:y4iJ
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 596596Uncharacterized protein y4iJPRO_0000200862Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a03230.

Structurei

3D structure databases

ProteinModelPortaliP55493.
ModBaseiSearch...
MobiDBiSearch...

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2620HelicalSequence AnalysisAdd
BLAST

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG82117.
HOGENOMiHOG000247224.
OMAiACHTGEL.
OrthoDBiEOG63RGN5.

Family and domain databases

Gene3Di1.10.760.10. 2 hits.
InterProiIPR009056. Cyt_c-like_dom.
[Graphical view]
SUPFAMiSSF46626. SSF46626. 3 hits.

Sequencei

Sequence statusi: Complete.

P55493-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKRKSRFWPI LLGFTVLVAA GLYYVVRMFS VDLPDYPKVD KVTWLEQNWS
60 70 80 90 100
QSQRGWMHHA DQGTVTFSMP YEWLAALEQP TFTLTAGPPF LSSDYLDRFG
110 120 130 140 150
FITADSSGLP VGFAHGGDLV DPKTAQPWVN PATGKPLTTV GLTCAACHTG
160 170 180 190 200
RFTYKGTAVM VDGGPALTDL GKFRKASGLA LFFTRYAPFR FDRFATAVLG
210 220 230 240 250
PQADEKARAV LKKQLDKVLA GGRIEVDLDK KVAEKSIEEG FGRLDALNRI
260 270 280 290 300
GNQVFSLDLE RPENYVAQSA PVAFPHIWDT SWFDWVQYNA SIMQPMVRNA
310 320 330 340 350
GEALGVRAFI NLTKSEQPLF ASTVKVDTIF EIEQQLAGKQ PTAENGFTGL
360 370 380 390 400
RPPRWPSNLF GSIDTKLATE GAAVYADRCQ GCHLPPVGSE GFWEQKHWTN
410 420 430 440 450
ENSAGERYLR VPIINVENIG TDPAQAQSMA ERKVKLPSEL GIDTDSFGSA
460 470 480 490 500
LGALVAKTAA RWYDNQTPPV PAEQREIMNG NRQNGIQAPL AYKARPLDGI
510 520 530 540 550
WATPPFLHNG SVPTIDALLS PAGERPKTFW LGNREYDPDK LGYLTDELKG
560 570 580 590
GFKFDTAKPG NSNAGHEFSD TPGPGVIGPA LKPDEKAALI AYLKTL
Length:596
Mass (Da):65,459
Last modified:November 1, 1997 - v1
Checksum:iE8DC662A4F8BF20C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91705.1.
RefSeqiNP_443903.1. NC_000914.2.
WP_010875339.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91705; AAB91705; NGR_a03230.
GeneIDi962602.
KEGGirhi:NGR_a03230.
PATRICi32301397. VBIRhiSp122450_0333.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91705.1 .
RefSeqi NP_443903.1. NC_000914.2.
WP_010875339.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55493.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a03230.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91705 ; AAB91705 ; NGR_a03230 .
GeneIDi 962602.
KEGGi rhi:NGR_a03230.
PATRICi 32301397. VBIRhiSp122450_0333.

Phylogenomic databases

eggNOGi NOG82117.
HOGENOMi HOG000247224.
OMAi ACHTGEL.
OrthoDBi EOG63RGN5.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6374-MONOMER.

Family and domain databases

Gene3Di 1.10.760.10. 2 hits.
InterProi IPR009056. Cyt_c-like_dom.
[Graphical view ]
SUPFAMi SSF46626. SSF46626. 3 hits.
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4IJ_RHISN
AccessioniPrimary (citable) accession number: P55493
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 29, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names

External Data

Dasty 3