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P55493 (Y4IJ_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein y4iJ
Gene names
Ordered Locus Names:NGR_a03230
ORF Names:y4iJ
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length596 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Membrane; Single-pass membrane protein Potential.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionelectron carrier activity

Inferred from electronic annotation. Source: InterPro

heme binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 596596Uncharacterized protein y4iJ
PRO_0000200862

Regions

Transmembrane7 – 2620Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P55493 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: E8DC662A4F8BF20C

FASTA59665,459
        10         20         30         40         50         60 
MKRKSRFWPI LLGFTVLVAA GLYYVVRMFS VDLPDYPKVD KVTWLEQNWS QSQRGWMHHA 

        70         80         90        100        110        120 
DQGTVTFSMP YEWLAALEQP TFTLTAGPPF LSSDYLDRFG FITADSSGLP VGFAHGGDLV 

       130        140        150        160        170        180 
DPKTAQPWVN PATGKPLTTV GLTCAACHTG RFTYKGTAVM VDGGPALTDL GKFRKASGLA 

       190        200        210        220        230        240 
LFFTRYAPFR FDRFATAVLG PQADEKARAV LKKQLDKVLA GGRIEVDLDK KVAEKSIEEG 

       250        260        270        280        290        300 
FGRLDALNRI GNQVFSLDLE RPENYVAQSA PVAFPHIWDT SWFDWVQYNA SIMQPMVRNA 

       310        320        330        340        350        360 
GEALGVRAFI NLTKSEQPLF ASTVKVDTIF EIEQQLAGKQ PTAENGFTGL RPPRWPSNLF 

       370        380        390        400        410        420 
GSIDTKLATE GAAVYADRCQ GCHLPPVGSE GFWEQKHWTN ENSAGERYLR VPIINVENIG 

       430        440        450        460        470        480 
TDPAQAQSMA ERKVKLPSEL GIDTDSFGSA LGALVAKTAA RWYDNQTPPV PAEQREIMNG 

       490        500        510        520        530        540 
NRQNGIQAPL AYKARPLDGI WATPPFLHNG SVPTIDALLS PAGERPKTFW LGNREYDPDK 

       550        560        570        580        590 
LGYLTDELKG GFKFDTAKPG NSNAGHEFSD TPGPGVIGPA LKPDEKAALI AYLKTL 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91705.1.
RefSeqNP_443903.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55493.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a03230.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91705; AAB91705; NGR_a03230.
GeneID962602.
KEGGrhi:NGR_a03230.
PATRIC32301397. VBIRhiSp122450_0333.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG82117.
HOGENOMHOG000247224.
OMAACHTGEL.
OrthoDBEOG63RGN5.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6374-MONOMER.

Family and domain databases

Gene3D1.10.760.10. 2 hits.
InterProIPR009056. Cyt_c-like_dom.
[Graphical view]
SUPFAMSSF46626. SSF46626. 3 hits.
ProtoNetSearch...

Entry information

Entry nameY4IJ_RHISN
AccessionPrimary (citable) accession number: P55493
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names