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P55486

- Y4IC_RHISN

UniProt

P55486 - Y4IC_RHISN

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Protein
Uncharacterized protein y4iC
Gene
NGR_a03300, y4iC
Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6381-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein y4iC
Gene namesi
Ordered Locus Names:NGR_a03300
ORF Names:y4iC
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 230230Uncharacterized protein y4iC
PRO_0000200857Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a03300.

Structurei

3D structure databases

ProteinModelPortaliP55486.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1959.
OrthoDBiEOG6ZH2HM.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000944. Tscrpt_reg_Rrf2-like.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF02082. Rrf2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55486-1 [UniParc]FASTAAdd to Basket

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MYRERAFNAP ARASGVDLLD AAAYGQQSNG DRRGEPRFGG DIERLIGTQT    50
GKVRLLPGTT FVTEIAMRNK IPKKFLDTIL LELRNVLCVR RRVHMAGIRL 100
SKPASEIMIG QVIRALDGPL APIHCASRSA FACDDCNDPV YRQSVLVICH 150
RGKKLGYGVA AWLRNASRVE LSDVSRRIIA QHQLRISQRP RAHQYCPASR 200
RNHRNEIEMG GPLRFGIIVR LDRHTQSLVN 230
Length:230
Mass (Da):25,828
Last modified:November 1, 1997 - v1
Checksum:i1D1245B74538D73A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91698.1.
RefSeqiNP_443896.1. NC_000914.2.
WP_010875344.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91698; AAB91698; NGR_a03300.
GeneIDi962599.
KEGGirhi:NGR_a03300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB91698.1 .
RefSeqi NP_443896.1. NC_000914.2.
WP_010875344.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55486.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a03300.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91698 ; AAB91698 ; NGR_a03300 .
GeneIDi 962599.
KEGGi rhi:NGR_a03300.

Phylogenomic databases

eggNOGi COG1959.
OrthoDBi EOG6ZH2HM.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6381-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR000944. Tscrpt_reg_Rrf2-like.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF02082. Rrf2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4IC_RHISN
AccessioniPrimary (citable) accession number: P55486
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 3, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names

External Data

Dasty 3