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P55486

- Y4IC_RHISN

UniProt

P55486 - Y4IC_RHISN

Protein

Uncharacterized protein y4iC

Gene

NGR_a03300

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6381-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein y4iC
    Gene namesi
    Ordered Locus Names:NGR_a03300
    ORF Names:y4iC
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 230230Uncharacterized protein y4iCPRO_0000200857Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a03300.

    Structurei

    3D structure databases

    ProteinModelPortaliP55486.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1959.
    OrthoDBiEOG6ZH2HM.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR000944. Tscrpt_reg_Rrf2-like.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF02082. Rrf2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55486-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYRERAFNAP ARASGVDLLD AAAYGQQSNG DRRGEPRFGG DIERLIGTQT    50
    GKVRLLPGTT FVTEIAMRNK IPKKFLDTIL LELRNVLCVR RRVHMAGIRL 100
    SKPASEIMIG QVIRALDGPL APIHCASRSA FACDDCNDPV YRQSVLVICH 150
    RGKKLGYGVA AWLRNASRVE LSDVSRRIIA QHQLRISQRP RAHQYCPASR 200
    RNHRNEIEMG GPLRFGIIVR LDRHTQSLVN 230
    Length:230
    Mass (Da):25,828
    Last modified:November 1, 1997 - v1
    Checksum:i1D1245B74538D73A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91698.1.
    RefSeqiNP_443896.1. NC_000914.2.
    WP_010875344.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91698; AAB91698; NGR_a03300.
    GeneIDi962599.
    KEGGirhi:NGR_a03300.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91698.1 .
    RefSeqi NP_443896.1. NC_000914.2.
    WP_010875344.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55486.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a03300.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91698 ; AAB91698 ; NGR_a03300 .
    GeneIDi 962599.
    KEGGi rhi:NGR_a03300.

    Phylogenomic databases

    eggNOGi COG1959.
    OrthoDBi EOG6ZH2HM.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6381-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR000944. Tscrpt_reg_Rrf2-like.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF02082. Rrf2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4IC_RHISN
    AccessioniPrimary (citable) accession number: P55486
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names

    External Data

    Dasty 3