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P55471 (Y4HA_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Putative ionic transporter y4hA
Gene names
Ordered Locus Names:NGR_a03490
ORF Names:y4hA
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium ›

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Possible cation transporter.

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the sodium/potassium/calcium exchanger family.

Ontologies

Keywords
   Biological processIon transport
Transport
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functioncation transmembrane transporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 367367Putative ionic transporter y4hA
PRO_0000209508

Regions

Transmembrane12 – 3221Helical; Potential
Transmembrane39 – 5921Helical; Potential
Transmembrane74 – 9421Helical; Potential
Transmembrane108 – 12821Helical; Potential
Transmembrane143 – 16321Helical; Potential
Transmembrane172 – 19221Helical; Potential
Transmembrane221 – 24121Helical; Potential
Transmembrane249 – 26921Helical; Potential
Transmembrane291 – 31121Helical; Potential
Transmembrane318 – 33821Helical; Potential
Transmembrane347 – 36721Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P55471 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 3AC0B829F2EFA2CB

FASTA36738,079
        10         20         30         40         50         60 
MKSRLQVRSA HVPLWSWIIP LFGCVIAAMT LAHVLPERSV VLLLMSAGLL TGAVFASVHH 

        70         80         90        100        110        120 
AEILAARVGQ PSGAILLAVC VTIIEVAIIG SLMLSGAEGN EEVARDTVFA AVMIVLNGVI 

       130        140        150        160        170        180 
GLCLVLGGRR HREQSFQLNA ASAALAVLGT LATLSLVLPN FVTAGKPQQF AAIQLVVIGL 

       190        200        210        220        230        240 
VSVVLYGVFL FVQTVRHRDY FIDDEDAASP PATHETPRNP LAAGALLVLA LIAVILLAML 

       250        260        270        280        290        300 
LSYPLDSAVE ALGLPQAVVG VTIAGVVLLP EGITSVKAAL MNRLQNSINL VLGSALASIG 

       310        320        330        340        350        360 
VTIPVVAAIS VALGRDLALG LAPQNLIMLI LTLFVGTITL GTGRTTVLQG AVHLAIFTVF 


LLLSAIP

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U00090 Genomic DNA. Translation: AAB91689.1.
RefSeqNP_443877.1. NC_000914.2.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING394.NGR_a03490.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91689; AAB91689; NGR_a03490.
GeneID962313.
KEGGrhi:NGR_a03490.
PATRIC32301443. VBIRhiSp122450_0357.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0387.
HOGENOMHOG000197726.
KOK07300.
OMAAAVMITC.
ProtClustDBCLSK808999.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6400-MONOMER.

Family and domain databases

InterProIPR004713. CaH_exchang.
IPR004837. NaCa_Exmemb.
[Graphical view]
PfamPF01699. Na_Ca_ex. 1 hit.
[Graphical view]
TIGRFAMsTIGR00846. caca2. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY4HA_RHISN
AccessionPrimary (citable) accession number: P55471
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 29, 2013
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names

SIMILARITY comments

Index of protein domains and families

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