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P55450 (Y4FL_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein y4fL
Gene names
Ordered Locus Names:NGR_a03700
ORF Names:y4fL
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length275 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the inositol monophosphatase family.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   LigandMagnesium
Metal-binding
   Molecular functionHydrolase
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processphosphatidylinositol phosphorylation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionhydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 275275Uncharacterized protein y4fL
PRO_0000142583

Regions

Transmembrane87 – 10721Helical; Potential
Transmembrane112 – 13221Helical; Potential
Transmembrane178 – 19821Helical; Potential
Region87 – 904Substrate binding By similarity

Sites

Metal binding711Magnesium 1 By similarity
Metal binding851Magnesium 1 By similarity
Metal binding851Magnesium 2 By similarity
Metal binding871Magnesium 1; via carbonyl oxygen By similarity
Metal binding881Magnesium 2 By similarity
Metal binding2081Magnesium 2 By similarity
Binding site711Substrate By similarity
Binding site2081Substrate By similarity

Sequences

Sequence LengthMass (Da)Tools
P55450 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 3A7938DA773CCE80

FASTA27529,147
        10         20         30         40         50         60 
MTSDLDTRLD LLRNITSKVG AFALARFGNL SHIVIETKGE ADYVSAADRD AESLARRLIH 

        70         80         90        100        110        120 
AQFPADAIVG EEQLGDAEVD HWLIDPIDGT ANFLSGIPLW AVSIAFVRNK EPVLGAVALP 

       130        140        150        160        170        180 
ALDTLLWASV DGPLHGTGSV SPLVGAQPIA FGIGRNRTWP LAHRLEVEAA FEARGYHIVC 

       190        200        210        220        230        240 
LGSCAAALAM VAAGRLAGYV EHGTHLWDCA AGHVLCRAAG APSSILFEAD GKVAIIAAPQ 

       250        260        270 
HLRVTAKADA RSLSEKHIFD PGSDRISHRM ESSAD 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91668.1.
RefSeqNP_443856.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55450.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a03700.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91668; AAB91668; NGR_a03700.
GeneID962177.
KEGGrhi:NGR_a03700.
PATRIC32301485. VBIRhiSp122450_0378.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0483.
HOGENOMHOG000282238.
KOK01092.
OMARCATVGL.
OrthoDBEOG6QK4W4.

Enzyme and pathway databases

BioCycRETL1328306-WGS:GSTH-6510-MONOMER.
SFRE394:GBYN-6421-MONOMER.

Family and domain databases

InterProIPR020583. Inositol_monoP_metal-BS.
IPR000760. Inositol_monophosphatase.
IPR020550. Inositol_monophosphatase_CS.
[Graphical view]
PANTHERPTHR20854. PTHR20854. 1 hit.
PfamPF00459. Inositol_P. 1 hit.
[Graphical view]
PRINTSPR00377. IMPHPHTASES.
PROSITEPS00629. IMP_1. 1 hit.
PS00630. IMP_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4FL_RHISN
AccessionPrimary (citable) accession number: P55450
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 9, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names