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Protein

Uncharacterized protein y4fL

Gene

NGR_a03700

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi71 – 711Magnesium 1By similarity
Binding sitei71 – 711SubstrateBy similarity
Metal bindingi85 – 851Magnesium 1By similarity
Metal bindingi85 – 851Magnesium 2By similarity
Metal bindingi87 – 871Magnesium 1; via carbonyl oxygenBy similarity
Metal bindingi88 – 881Magnesium 2By similarity
Metal bindingi208 – 2081Magnesium 2By similarity
Binding sitei208 – 2081SubstrateBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-6510-MONOMER.
SFRE394:GBYN-6421-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein y4fL
Gene namesi
Ordered Locus Names:NGR_a03700
ORF Names:y4fL
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054 Componenti: Plasmid sym pNGR234a

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei87 – 10721HelicalSequence AnalysisAdd
BLAST
Transmembranei112 – 13221HelicalSequence AnalysisAdd
BLAST
Transmembranei178 – 19821HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 275275Uncharacterized protein y4fLPRO_0000142583Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP55450.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni87 – 904Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the inositol monophosphatase family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0483.
HOGENOMiHOG000282238.
KOiK01092.
OMAiRCATVGL.
OrthoDBiEOG6QK4W4.

Family and domain databases

InterProiIPR020583. Inositol_monoP_metal-BS.
IPR000760. Inositol_monophosphatase.
IPR020550. Inositol_monophosphatase_CS.
[Graphical view]
PANTHERiPTHR20854. PTHR20854. 1 hit.
PfamiPF00459. Inositol_P. 1 hit.
[Graphical view]
PRINTSiPR00377. IMPHPHTASES.
PROSITEiPS00629. IMP_1. 1 hit.
PS00630. IMP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55450-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSDLDTRLD LLRNITSKVG AFALARFGNL SHIVIETKGE ADYVSAADRD
60 70 80 90 100
AESLARRLIH AQFPADAIVG EEQLGDAEVD HWLIDPIDGT ANFLSGIPLW
110 120 130 140 150
AVSIAFVRNK EPVLGAVALP ALDTLLWASV DGPLHGTGSV SPLVGAQPIA
160 170 180 190 200
FGIGRNRTWP LAHRLEVEAA FEARGYHIVC LGSCAAALAM VAAGRLAGYV
210 220 230 240 250
EHGTHLWDCA AGHVLCRAAG APSSILFEAD GKVAIIAAPQ HLRVTAKADA
260 270
RSLSEKHIFD PGSDRISHRM ESSAD
Length:275
Mass (Da):29,147
Last modified:November 1, 1997 - v1
Checksum:i3A7938DA773CCE80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91668.1.
RefSeqiNP_443856.1. NC_000914.2.
WP_010875383.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91668; AAB91668; NGR_a03700.
GeneIDi962177.
KEGGirhi:NGR_a03700.
PATRICi32301485. VBIRhiSp122450_0378.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91668.1.
RefSeqiNP_443856.1. NC_000914.2.
WP_010875383.1. NC_000914.2.

3D structure databases

ProteinModelPortaliP55450.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB91668; AAB91668; NGR_a03700.
GeneIDi962177.
KEGGirhi:NGR_a03700.
PATRICi32301485. VBIRhiSp122450_0378.

Phylogenomic databases

eggNOGiCOG0483.
HOGENOMiHOG000282238.
KOiK01092.
OMAiRCATVGL.
OrthoDBiEOG6QK4W4.

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-6510-MONOMER.
SFRE394:GBYN-6421-MONOMER.

Family and domain databases

InterProiIPR020583. Inositol_monoP_metal-BS.
IPR000760. Inositol_monophosphatase.
IPR020550. Inositol_monophosphatase_CS.
[Graphical view]
PANTHERiPTHR20854. PTHR20854. 1 hit.
PfamiPF00459. Inositol_P. 1 hit.
[Graphical view]
PRINTSiPR00377. IMPHPHTASES.
PROSITEiPS00629. IMP_1. 1 hit.
PS00630. IMP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4FL_RHISN
AccessioniPrimary (citable) accession number: P55450
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: June 24, 2015
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.