Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P55440 (Y4FB_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein y4fB
Gene names
Ordered Locus Names:NGR_a03790
ORF Names:y4fB
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length664 AA.
Sequence statusComplete.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 664664Uncharacterized protein y4fB
PRO_0000200834

Sequences

Sequence LengthMass (Da)Tools
P55440 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: CFCC041FB73C064F

FASTA66473,732
        10         20         30         40         50         60 
MEISKFADEQ LADQIAAGRE AVPEVDPIRL IEQVVHRARA GAGVDFDVFE SLIGEIDLVE 

        70         80         90        100        110        120 
INYLERGLMA SRAVCRINVP APVGDSSDWG TGFLIGPRLL LTNNHVIDSA EDALKATVEF 

       130        140        150        160        170        180 
GYELDAEGRL KRTTRFRLSP QDGFVTSPRD ALDYTVVAIE ENSEDGATPI SDFGFLRLDA 

       190        200        210        220        230        240 
RTGKTEVGQY ATIIQHPDAK TKRISLRENK FVKYGDEADP ERDNFLWYSS DTANGSSGAA 

       250        260        270        280        290        300 
VFTDAWQVVC LHHAGVPDRR MIDGKEHWVL TDKTTAPARI AINLPVDKVH WLANEGVRIS 

       310        320        330        340        350        360 
KLIADVQERI AAPGFARSTL VDDLVADATG VKAFAGTTPG ESIVGPPLVA APALRLVAAE 

       370        380        390        400        410        420 
ARRRPTRHTH PANYFDGREG YRSDFLPVEI PLPTLGVNAL RHGSPAKVTG AADDVLRYQH 

       430        440        450        460        470        480 
FSVVLNANPK RKMAFYTAVN IDGARWTNLE RGNDVWFYDP RIPEELQNGD ELYGDEPVPS 

       490        500        510        520        530        540 
KNYFDRGHLV RRLDPVWGEI RVAKQANDDT FQWTNCSPQY WGFNQGADLW QGLENFLLYN 

       550        560        570        580        590        600 
TDDENVQASV FSGPLFRADD EEHRGILIPQ FFWKVIAVTD KNDRLYTSGY MVSQQDYALD 

       610        620        630        640        650        660 
IPFERLPVGP NSTKPGQNFQ VPVAKIIEDT GIVFADEILS ADAYSGPSTG RALRTVADIQ 


HPRR 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB91659.1.
RefSeqNP_443847.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55440.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a03790.

Proteomic databases

PRIDEP55440.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB91659; AAB91659; NGR_a03790.
GeneID962298.
KEGGrhi:NGR_a03790.
PATRIC32301503. VBIRhiSp122450_0387.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1864.
HOGENOMHOG000274111.
KOK01173.
OMATNCSPQH.
OrthoDBEOG6Z0Q78.

Enzyme and pathway databases

BioCycSFRE394:GBYN-6430-MONOMER.

Family and domain databases

Gene3D3.40.570.10. 1 hit.
InterProIPR001604. DNA/RNA_non-sp_Endonuclease.
IPR020821. Extracellular_endonuc_su_A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamPF01223. Endonuclease_NS. 1 hit.
[Graphical view]
SMARTSM00892. Endonuclease_NS. 1 hit.
SM00477. NUC. 1 hit.
[Graphical view]
SUPFAMSSF50494. SSF50494. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY4FB_RHISN
AccessionPrimary (citable) accession number: P55440
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: April 16, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names