Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P55440

- Y4FB_RHISN

UniProt

P55440 - Y4FB_RHISN

Protein

Uncharacterized protein y4fB

Gene

NGR_a03790

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. hydrolase activity Source: InterPro
    2. metal ion binding Source: InterPro
    3. nucleic acid binding Source: InterPro

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6430-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein y4fB
    Gene namesi
    Ordered Locus Names:NGR_a03790
    ORF Names:y4fB
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 664664Uncharacterized protein y4fBPRO_0000200834Add
    BLAST

    Proteomic databases

    PRIDEiP55440.

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a03790.

    Structurei

    3D structure databases

    ProteinModelPortaliP55440.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1864.
    HOGENOMiHOG000274111.
    KOiK01173.
    OMAiTNCSPQH.
    OrthoDBiEOG6Z0Q78.

    Family and domain databases

    Gene3Di3.40.570.10. 1 hit.
    InterProiIPR001604. DNA/RNA_non-sp_Endonuclease.
    IPR020821. Extracellular_endonuc_su_A.
    IPR009003. Trypsin-like_Pept_dom.
    [Graphical view]
    PfamiPF01223. Endonuclease_NS. 1 hit.
    [Graphical view]
    SMARTiSM00892. Endonuclease_NS. 1 hit.
    SM00477. NUC. 1 hit.
    [Graphical view]
    SUPFAMiSSF50494. SSF50494. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P55440-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEISKFADEQ LADQIAAGRE AVPEVDPIRL IEQVVHRARA GAGVDFDVFE    50
    SLIGEIDLVE INYLERGLMA SRAVCRINVP APVGDSSDWG TGFLIGPRLL 100
    LTNNHVIDSA EDALKATVEF GYELDAEGRL KRTTRFRLSP QDGFVTSPRD 150
    ALDYTVVAIE ENSEDGATPI SDFGFLRLDA RTGKTEVGQY ATIIQHPDAK 200
    TKRISLRENK FVKYGDEADP ERDNFLWYSS DTANGSSGAA VFTDAWQVVC 250
    LHHAGVPDRR MIDGKEHWVL TDKTTAPARI AINLPVDKVH WLANEGVRIS 300
    KLIADVQERI AAPGFARSTL VDDLVADATG VKAFAGTTPG ESIVGPPLVA 350
    APALRLVAAE ARRRPTRHTH PANYFDGREG YRSDFLPVEI PLPTLGVNAL 400
    RHGSPAKVTG AADDVLRYQH FSVVLNANPK RKMAFYTAVN IDGARWTNLE 450
    RGNDVWFYDP RIPEELQNGD ELYGDEPVPS KNYFDRGHLV RRLDPVWGEI 500
    RVAKQANDDT FQWTNCSPQY WGFNQGADLW QGLENFLLYN TDDENVQASV 550
    FSGPLFRADD EEHRGILIPQ FFWKVIAVTD KNDRLYTSGY MVSQQDYALD 600
    IPFERLPVGP NSTKPGQNFQ VPVAKIIEDT GIVFADEILS ADAYSGPSTG 650
    RALRTVADIQ HPRR 664
    Length:664
    Mass (Da):73,732
    Last modified:November 1, 1997 - v1
    Checksum:iCFCC041FB73C064F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91659.1.
    RefSeqiNP_443847.1. NC_000914.2.
    WP_010875391.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91659; AAB91659; NGR_a03790.
    GeneIDi962298.
    KEGGirhi:NGR_a03790.
    PATRICi32301503. VBIRhiSp122450_0387.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91659.1 .
    RefSeqi NP_443847.1. NC_000914.2.
    WP_010875391.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55440.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a03790.

    Proteomic databases

    PRIDEi P55440.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91659 ; AAB91659 ; NGR_a03790 .
    GeneIDi 962298.
    KEGGi rhi:NGR_a03790.
    PATRICi 32301503. VBIRhiSp122450_0387.

    Phylogenomic databases

    eggNOGi COG1864.
    HOGENOMi HOG000274111.
    KOi K01173.
    OMAi TNCSPQH.
    OrthoDBi EOG6Z0Q78.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6430-MONOMER.

    Family and domain databases

    Gene3Di 3.40.570.10. 1 hit.
    InterProi IPR001604. DNA/RNA_non-sp_Endonuclease.
    IPR020821. Extracellular_endonuc_su_A.
    IPR009003. Trypsin-like_Pept_dom.
    [Graphical view ]
    Pfami PF01223. Endonuclease_NS. 1 hit.
    [Graphical view ]
    SMARTi SM00892. Endonuclease_NS. 1 hit.
    SM00477. NUC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50494. SSF50494. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4FB_RHISN
    AccessioniPrimary (citable) accession number: P55440
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names

    External Data

    Dasty 3