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P55434

- Y4EK_RHISN

UniProt

P55434 - Y4EK_RHISN

Protein

Uncharacterized short-chain type dehydrogenase/reductase y4eK

Gene

NGR_a03840

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei134 – 1341SubstrateBy similarity
    Active sitei147 – 1471Proton acceptorPROSITE-ProRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi8 – 3225NAD or NADPBy similarityAdd
    BLAST

    GO - Molecular functioni

    1. oxidoreductase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Oxidoreductase

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6435-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized short-chain type dehydrogenase/reductase y4eK (EC:1.-.-.-)
    Gene namesi
    Ordered Locus Names:NGR_a03840
    ORF Names:y4eK
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 248248Uncharacterized short-chain type dehydrogenase/reductase y4eKPRO_0000054885Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a03840.

    Structurei

    3D structure databases

    ProteinModelPortaliP55434.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG4221.
    OMAiAMIDINI.
    OrthoDBiEOG6N3CR8.

    Family and domain databases

    Gene3Di3.40.50.720. 1 hit.
    InterProiIPR002198. DH_sc/Rdtase_SDR.
    IPR002347. Glc/ribitol_DH.
    IPR016040. NAD(P)-bd_dom.
    IPR020904. Sc_DH/Rdtase_CS.
    [Graphical view]
    PfamiPF00106. adh_short. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000126. 11-beta-HSD1. 1 hit.
    PRINTSiPR00081. GDHRDH.
    PR00080. SDRFAMILY.
    PROSITEiPS00061. ADH_SHORT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55434-1 [UniParc]FASTAAdd to Basket

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    MHPMNRYEVA LVTGASSGIG KAIALELASA GLRVLALGRD RAALDELHST    50
    AGIVPVVFDL SDVSEVYGKI AGEKIDVLVN NAGLLTASAS LVDLSEDDID 100
    AMIDINIRSV FKLTRHVLKQ MIERRRGHIF FTGSSGGLAP HPNSSVYGAT 150
    KAAVSLFSSA LRCDLIGLPI RVTELFPGRV ETNLYRTALG KEGAKKKLYD 200
    DNEAIQPEHM ARLLRTALEL PDFVDVTRLE VMPTGQVVGG AQMSKLSR 248
    Length:248
    Mass (Da):26,680
    Last modified:November 1, 1997 - v1
    Checksum:iBF8AD585C068A728
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91654.1.
    RefSeqiNP_443842.1. NC_000914.2.
    WP_010875396.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91654; AAB91654; NGR_a03840.
    GeneIDi962291.
    KEGGirhi:NGR_a03840.
    PATRICi32301523. VBIRhiSp122450_0397.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91654.1 .
    RefSeqi NP_443842.1. NC_000914.2.
    WP_010875396.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55434.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a03840.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91654 ; AAB91654 ; NGR_a03840 .
    GeneIDi 962291.
    KEGGi rhi:NGR_a03840.
    PATRICi 32301523. VBIRhiSp122450_0397.

    Phylogenomic databases

    eggNOGi COG4221.
    OMAi AMIDINI.
    OrthoDBi EOG6N3CR8.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6435-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 1 hit.
    InterProi IPR002198. DH_sc/Rdtase_SDR.
    IPR002347. Glc/ribitol_DH.
    IPR016040. NAD(P)-bd_dom.
    IPR020904. Sc_DH/Rdtase_CS.
    [Graphical view ]
    Pfami PF00106. adh_short. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000126. 11-beta-HSD1. 1 hit.
    PRINTSi PR00081. GDHRDH.
    PR00080. SDRFAMILY.
    PROSITEi PS00061. ADH_SHORT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4EK_RHISN
    AccessioniPrimary (citable) accession number: P55434
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3