P55434 (Y4EK_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized short-chain type dehydrogenase/reductase y4eK
EC=1.-.-.-

Gene names

Ordered Locus Names:	NGR_a03840
ORF Names:	y4eK

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	248 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Ontologies

Keywords
Molecular function	Oxidoreductase
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Molecular_function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 248	248	Uncharacterized short-chain type dehydrogenase/reductase y4eK		PRO_0000054885
Regions
	Nucleotide binding	8 – 32	25	NAD or NADP By similarity
Sites
	Active site	147	1	Proton acceptor By similarity
	Binding site	134	1	Substrate By similarity

Sequences

	Sequence		Length	Mass (Da)
	P55434 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: BF8AD585C068A728	FASTA	248	26,680
	10 20 30 40 50 60 MHPMNRYEVA LVTGASSGIG KAIALELASA GLRVLALGRD RAALDELHST AGIVPVVFDL 70 80 90 100 110 120 SDVSEVYGKI AGEKIDVLVN NAGLLTASAS LVDLSEDDID AMIDINIRSV FKLTRHVLKQ 130 140 150 160 170 180 MIERRRGHIF FTGSSGGLAP HPNSSVYGAT KAAVSLFSSA LRCDLIGLPI RVTELFPGRV 190 200 210 220 230 240 ETNLYRTALG KEGAKKKLYD DNEAIQPEHM ARLLRTALEL PDFVDVTRLE VMPTGQVVGG AQMSKLSR

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91654.1.
RefSeq	NP_443842.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55434.
ModBase	Search...
Protein-protein interaction databases
STRING	394.NGR_a03840.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB91654; AAB91654; NGR_a03840.
GeneID	962291.
KEGG	rhi:NGR_a03840.
PATRIC	32301523. VBIRhiSp122450_0397.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4221.
ProtClustDB	CLSK2484862.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. IPR020904. Sc_DH/Rdtase_CS. [Graphical view]
Pfam	PF00106. adh_short. 1 hit. [Graphical view]
PIRSF	PIRSF000126. 11-beta-HSD1. 1 hit.
PRINTS	PR00081. GDHRDH. PR00080. SDRFAMILY.
PROSITE	PS00061. ADH_SHORT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4EK_RHISN

Accession

Primary (citable) accession number: P55434

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 1, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program