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Reviewed, UniProtKB/Swiss-Prot P55426 (Y4EC_RHISN)

Last modified September 22, 2009. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Uncharacterized protein y4eC
Gene names
Ordered Locus Names: NGR_a03900
ORF Names: y4eC
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 307307Uncharacterized protein y4eC
PRO_0000200829

Sequences

Sequence LengthMass (Da)Tools
P55426-1 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 9D9F0AB619F78ABB

FASTA30734,172
        10         20         30         40         50         60 
MTTDRTPQTP TDIYERVTSQ IIAAIEAGAS DYRMPWHHDG SAITTPVNVA SSKAYRGVNI 

        70         80         90        100        110        120 
LSLWAAAHAE GYAAGIWGTY RQWQALDAQV RKGERGHLVV FWKTTDRDAA DAQHGDEDRH 

       130        140        150        160        170        180 
EPARRLFARG YTVFNCAQVD GYTPPEMPVL PEAERIERAE RFCASLGIDI RHGGSQAYYR 

       190        200        210        220        230        240 
PSTDHVQMPE FACFRDAVAY YAVLLHECGH ASGAKHRLDR DLSGRFGSAA YAMEECTVEL 

       250        260        270        280        290        300 
LSAMICADLN LSVEARPDHA RYIASWLEAL RSDQRAIFTA ASKAQQIADW MHAQQSDAQR 


NEVRGAA 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed: 9163424] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

U00090 Genomic DNA. Translation: AAB92447.1.
RefSeqNP_443836.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID962237.
GenomeReviewsGene locus NGR_a03900 in contig U00090_GR.

Organism-specific databases

CMRSearch...

Family and domain databases

InterProIPR017113. Antirestriction_ArdC.
IPR013610. DUF1738.
[Graphical view]
PfamPF08401. DUF1738. 1 hit.
[Graphical view]
PIRSFPIRSF037112. Antirestriction_ArdC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY4EC_RHISN
AccessionPrimary (citable) accession number: P55426
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 22, 2009
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents