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Reviewed, UniProtKB/Swiss-Prot P55423 (Y4DX_RHISN)

Last modified December 15, 2009. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Uncharacterized protein y4dX
Gene names
Ordered Locus Names: NGR_a03930
ORF Names: y4dX
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length192 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 192192Uncharacterized protein y4dX
PRO_0000200826

Sequences

Sequence LengthMass (Da)Tools
P55423-1 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: A2B0B751AD579EB5

FASTA19220,638
        10         20         30         40         50         60 
MAAHLCRGRG AVGRREMLRG SGKKPIQRLA KAPAATASSK TSEWRATTAY GFLPAGGDVR 

        70         80         90        100        110        120 
PHSPRYESQG VLSDPADLGE RFAARDELAE EGKEERFAEP PDRRLGLDVK GAANDIGVEF 

       130        140        150        160        170        180 
IEDDPEAQVC IEAGPPLLDG RNFSRAASLL GLLGGDREKQ NQVVIRSGKP HADGDWPILP 

       190 
PLYLSFSGLP RA 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed: 9163424] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

U00090 Genomic DNA. Translation: AAB92444.1.
RefSeqNP_443833.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID962283.
GenomeReviewsGene locus NGR_a03930 in contig U00090_GR.
KEGGrhi:NGR_a03930.

Organism-specific databases

CMRSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameY4DX_RHISN
AccessionPrimary (citable) accession number: P55423
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: December 15, 2009
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents