Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P55420

- TRAD_RHISN

UniProt

P55420 - TRAD_RHISN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Probable conjugal transfer protein TraD

Gene

traD

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Biological processi

  1. conjugation Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Conjugation

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-6569-MONOMER.
SFRE394:GBYN-6447-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable conjugal transfer protein TraD
Gene namesi
Name:traD
Ordered Locus Names:NGR_a03960
ORF Names:y4dU
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7171Probable conjugal transfer protein TraDPRO_0000065605Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a03960.

Family & Domainsi

Sequence similaritiesi

Belongs to the TraD family.Curated

Phylogenomic databases

eggNOGiNOG145755.
HOGENOMiHOG000138065.
OMAiSDDRKKD.
OrthoDBiEOG6G4W13.

Family and domain databases

InterProiIPR009444. Conjugal_tfr_TraD_a-type.
[Graphical view]
PfamiPF06412. TraD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55420-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARSATSDAR KKDTREKIEL GGLIVKAGLR YEKRVLLLGA LVDLSRRLNS
60 70
DESERARLIA IGAEAFGDDG E
Length:71
Mass (Da):7,773
Last modified:November 1, 1997 - v1
Checksum:i9448FDEC63B61BA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB92441.1.
RefSeqiNP_443830.1. NC_000914.2.
WP_010875408.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB92441; AAB92441; NGR_a03960.
GeneIDi962307.
KEGGirhi:NGR_a03960.
PATRICi32301563. VBIRhiSp122450_0417.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB92441.1 .
RefSeqi NP_443830.1. NC_000914.2.
WP_010875408.1. NC_000914.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a03960.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB92441 ; AAB92441 ; NGR_a03960 .
GeneIDi 962307.
KEGGi rhi:NGR_a03960.
PATRICi 32301563. VBIRhiSp122450_0417.

Phylogenomic databases

eggNOGi NOG145755.
HOGENOMi HOG000138065.
OMAi SDDRKKD.
OrthoDBi EOG6G4W13.

Enzyme and pathway databases

BioCyci RETL1328306-WGS:GSTH-6569-MONOMER.
SFRE394:GBYN-6447-MONOMER.

Family and domain databases

InterProi IPR009444. Conjugal_tfr_TraD_a-type.
[Graphical view ]
Pfami PF06412. TraD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiTRAD_RHISN
AccessioniPrimary (citable) accession number: P55420
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 26, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3