P55419 (TRAC_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable conjugal transfer protein traC

Gene names

Name:	traC
Ordered Locus Names:	NGR_a03970
ORF Names:	y4dT

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	102 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

To A.tumefaciens Ti plasmid traC.

Ontologies

Keywords
Biological process	Conjugation
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological process	conjugation Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 102	102	Probable conjugal transfer protein traC		PRO_0000065601

Sequences

	Sequence		Length	Mass (Da)
	P55419 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: AA378F93DD06C78B	FASTA	102	10,205
	10 20 30 40 50 60 MKKPASKIRD EIAKLQEQLR QAETREAERI GRIALKAGLG GIEVEEAELQ AAFESLAKRF 70 80 90 100 RGGQGGANGA SSGGKKPDGN ATAGASAAAV GSGAAQGGNG EA

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB92440.1.
RefSeq	NP_443829.1. NC_000914.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	P55419.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	962616.
GenomeReviews	Gene locus NGR_a03970 in contig U00090_GR.
KEGG	rhi:NGR_a03970.
PATRIC	32301565. VBIRhiSp122450_0418.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG550151.
OMA	HDKAEAE.
ProtClustDB	PRK13848.
Family and domain databases
InterPro	IPR012930. TraC. [Graphical view]
Pfam	PF07820. TraC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

TRAC_RHISN

Accession

Primary (citable) accession number: P55419

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program