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P55418

- TRAA_RHISN

UniProt

P55418 - TRAA_RHISN

Protein

Probable conjugal transfer protein TraA

Gene

traA

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi404 – 4118ATPSequence Analysis

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW

    GO - Biological processi

    1. unidirectional conjugation Source: InterPro

    Keywords - Biological processi

    Conjugation

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-6571-MONOMER.
    SFRE394:GBYN-6449-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable conjugal transfer protein TraA
    Gene namesi
    Name:traA
    Ordered Locus Names:NGR_a03980
    ORF Names:y4dS
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 11021102Probable conjugal transfer protein TraAPRO_0000210855Add
    BLAST

    Proteomic databases

    PRIDEiP55418.

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a03980.

    Structurei

    3D structure databases

    ProteinModelPortaliP55418.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the MobA/MobL family.Curated

    Phylogenomic databases

    eggNOGiCOG0507.
    HOGENOMiHOG000138087.
    OMAiVPTTHIG.
    OrthoDBiEOG6TXQS4.

    Family and domain databases

    Gene3Di3.40.50.300. 3 hits.
    InterProiIPR005053. MobA_MobL.
    IPR027417. P-loop_NTPase.
    IPR014136. TraA_Ti.
    IPR027785. UvrD_like_helicase_C.
    [Graphical view]
    PfamiPF03389. MobA_MobL. 1 hit.
    PF13538. UvrD_C_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 4 hits.
    TIGRFAMsiTIGR02768. TraA_Ti. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P55418-1 [UniParc]FASTAAdd to Basket

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    MAVPHFSVSV VARGSGRSAV LSAAYRHCAR MDYEREARTI DYRAKQGLLH     50
    EEFVIPAESP EWLRSMIADR SVASASEAFW NKVEDFEKRS DAQLAKDVTI 100
    ALPIELTTEQ NIVLVRDFVE RHVTAKGMVA DWVYHDAPGN PHVHLMTTLR 150
    PLTADGFGAK KLAVVGPDGN SLRNDAGKIV YELWAGSLDD FNAFRDGWFA 200
    CQNRHLALAG LDIRIDGRSF EKQGIELTPT IHLGVGTKAI ERKATTDDQA 250
    VSLERLELQE EKRAENARRI QRRPEIVLDL ITREKSVFDE RDVAKILHRY 300
    IDDPGVFHSL MARILQSPKT LRLERERIAF ATGIRAPAKY TTRELIRLEA 350
    EMGSRAIWLS RRSSHGVRKE VLEAAFSRHS RLSDEQKTAI EHVAGAERIA 400
    AVIGRAGAGK TTMMKAAREA WEAAGYRVVG GALAGKAAEG LEKEAGIASR 450
    TLSSWELRWN EGRKQLDDKT IFVLDEAGMV SSRQMALFVE TATKAGAKLV 500
    LVGDPEQLQP IEAGAAFRAI ADRIGYAELE TIYRQREQWM CDASLDLARG 550
    NVGKVVDTYR ANGRMMRSEL KAEAVQNLIA DWDRDYDPTK TTLILAHLRR 600
    DVRMLNQMAR AKLVERGIVD AGFSFKAEDG NRRFAPGDQI VFLKNEGALG 650
    VKNGMRGKVV EAAQNRIVAE IGEVEHRRQV MVESRFYNNL DHGYATTIHK 700
    SQGATVDRVK VLASLSLDRH LTYVAMTRHR EDLGVYYGAR SFAKSGGLIQ 750
    ILSQKNSKET TLDYEKATFY RQALRFAEAR GMHLVNVART IARDRLEWTV 800
    RQKQKLADLT QRLVAIGARF GLAVGAKTTN SQNLKETRPM VAGIATFPKS 850
    MEQAVADRLE VDPGLKKQWE DVSTRFHLVY TQPEVAFKAV NVDAMLKDET 900
    VAKSALSNMA NQPESYGSLK GKTGLLASRA DKQDRERAER NVPALAQSLS 950
    DYMRQRSRAE QCYQADELAV RRKVAIEIPA LSPGARQTLE RVRDAIDRND 1000
    LPAALEFALA DRQVKAELEG FARAVTERFG ERAFLPLAAK DTNGETFKTI 1050
    TAGMNPGPKA EVQSAWNTMR TVQQLNAHER TIEALKQAET LRQTKSQGLS 1100
    LK 1102
    Length:1,102
    Mass (Da):123,034
    Last modified:November 1, 1997 - v1
    Checksum:iEC17A5528F7B9CAF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91648.1.
    RefSeqiNP_443828.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91648; AAB91648; NGR_a03980.
    GeneIDi962280.
    KEGGirhi:NGR_a03980.
    PATRICi32301567. VBIRhiSp122450_0419.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91648.1 .
    RefSeqi NP_443828.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55418.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a03980.

    Proteomic databases

    PRIDEi P55418.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91648 ; AAB91648 ; NGR_a03980 .
    GeneIDi 962280.
    KEGGi rhi:NGR_a03980.
    PATRICi 32301567. VBIRhiSp122450_0419.

    Phylogenomic databases

    eggNOGi COG0507.
    HOGENOMi HOG000138087.
    OMAi VPTTHIG.
    OrthoDBi EOG6TXQS4.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-6571-MONOMER.
    SFRE394:GBYN-6449-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 3 hits.
    InterProi IPR005053. MobA_MobL.
    IPR027417. P-loop_NTPase.
    IPR014136. TraA_Ti.
    IPR027785. UvrD_like_helicase_C.
    [Graphical view ]
    Pfami PF03389. MobA_MobL. 1 hit.
    PF13538. UvrD_C_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 4 hits.
    TIGRFAMsi TIGR02768. TraA_Ti. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiTRAA_RHISN
    AccessioniPrimary (citable) accession number: P55418
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3