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P55418

- TRAA_RHISN

UniProt

P55418 - TRAA_RHISN

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Protein

Probable conjugal transfer protein TraA

Gene

traA

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi404 – 4118ATPSequence Analysis

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. conjugation Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Conjugation

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-6571-MONOMER.
SFRE394:GBYN-6449-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable conjugal transfer protein TraA
Gene namesi
Name:traA
Ordered Locus Names:NGR_a03980
ORF Names:y4dS
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11021102Probable conjugal transfer protein TraAPRO_0000210855Add
BLAST

Proteomic databases

PRIDEiP55418.

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a03980.

Structurei

3D structure databases

ProteinModelPortaliP55418.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MobA/MobL family.Curated

Phylogenomic databases

eggNOGiCOG0507.
HOGENOMiHOG000138087.
OMAiVPTTHIG.
OrthoDBiEOG6TXQS4.

Family and domain databases

Gene3Di3.40.50.300. 3 hits.
InterProiIPR005053. MobA_MobL.
IPR027417. P-loop_NTPase.
IPR014136. TraA_Ti.
IPR027785. UvrD_like_helicase_C.
[Graphical view]
PfamiPF03389. MobA_MobL. 1 hit.
PF13538. UvrD_C_2. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 4 hits.
TIGRFAMsiTIGR02768. TraA_Ti. 1 hit.

Sequencei

Sequence statusi: Complete.

P55418-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MAVPHFSVSV VARGSGRSAV LSAAYRHCAR MDYEREARTI DYRAKQGLLH
60 70 80 90 100
EEFVIPAESP EWLRSMIADR SVASASEAFW NKVEDFEKRS DAQLAKDVTI
110 120 130 140 150
ALPIELTTEQ NIVLVRDFVE RHVTAKGMVA DWVYHDAPGN PHVHLMTTLR
160 170 180 190 200
PLTADGFGAK KLAVVGPDGN SLRNDAGKIV YELWAGSLDD FNAFRDGWFA
210 220 230 240 250
CQNRHLALAG LDIRIDGRSF EKQGIELTPT IHLGVGTKAI ERKATTDDQA
260 270 280 290 300
VSLERLELQE EKRAENARRI QRRPEIVLDL ITREKSVFDE RDVAKILHRY
310 320 330 340 350
IDDPGVFHSL MARILQSPKT LRLERERIAF ATGIRAPAKY TTRELIRLEA
360 370 380 390 400
EMGSRAIWLS RRSSHGVRKE VLEAAFSRHS RLSDEQKTAI EHVAGAERIA
410 420 430 440 450
AVIGRAGAGK TTMMKAAREA WEAAGYRVVG GALAGKAAEG LEKEAGIASR
460 470 480 490 500
TLSSWELRWN EGRKQLDDKT IFVLDEAGMV SSRQMALFVE TATKAGAKLV
510 520 530 540 550
LVGDPEQLQP IEAGAAFRAI ADRIGYAELE TIYRQREQWM CDASLDLARG
560 570 580 590 600
NVGKVVDTYR ANGRMMRSEL KAEAVQNLIA DWDRDYDPTK TTLILAHLRR
610 620 630 640 650
DVRMLNQMAR AKLVERGIVD AGFSFKAEDG NRRFAPGDQI VFLKNEGALG
660 670 680 690 700
VKNGMRGKVV EAAQNRIVAE IGEVEHRRQV MVESRFYNNL DHGYATTIHK
710 720 730 740 750
SQGATVDRVK VLASLSLDRH LTYVAMTRHR EDLGVYYGAR SFAKSGGLIQ
760 770 780 790 800
ILSQKNSKET TLDYEKATFY RQALRFAEAR GMHLVNVART IARDRLEWTV
810 820 830 840 850
RQKQKLADLT QRLVAIGARF GLAVGAKTTN SQNLKETRPM VAGIATFPKS
860 870 880 890 900
MEQAVADRLE VDPGLKKQWE DVSTRFHLVY TQPEVAFKAV NVDAMLKDET
910 920 930 940 950
VAKSALSNMA NQPESYGSLK GKTGLLASRA DKQDRERAER NVPALAQSLS
960 970 980 990 1000
DYMRQRSRAE QCYQADELAV RRKVAIEIPA LSPGARQTLE RVRDAIDRND
1010 1020 1030 1040 1050
LPAALEFALA DRQVKAELEG FARAVTERFG ERAFLPLAAK DTNGETFKTI
1060 1070 1080 1090 1100
TAGMNPGPKA EVQSAWNTMR TVQQLNAHER TIEALKQAET LRQTKSQGLS

LK
Length:1,102
Mass (Da):123,034
Last modified:November 1, 1997 - v1
Checksum:iEC17A5528F7B9CAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91648.1.
RefSeqiNP_443828.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB91648; AAB91648; NGR_a03980.
GeneIDi962280.
KEGGirhi:NGR_a03980.
PATRICi32301567. VBIRhiSp122450_0419.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00090 Genomic DNA. Translation: AAB91648.1 .
RefSeqi NP_443828.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55418.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a03980.

Proteomic databases

PRIDEi P55418.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB91648 ; AAB91648 ; NGR_a03980 .
GeneIDi 962280.
KEGGi rhi:NGR_a03980.
PATRICi 32301567. VBIRhiSp122450_0419.

Phylogenomic databases

eggNOGi COG0507.
HOGENOMi HOG000138087.
OMAi VPTTHIG.
OrthoDBi EOG6TXQS4.

Enzyme and pathway databases

BioCyci RETL1328306-WGS:GSTH-6571-MONOMER.
SFRE394:GBYN-6449-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 3 hits.
InterProi IPR005053. MobA_MobL.
IPR027417. P-loop_NTPase.
IPR014136. TraA_Ti.
IPR027785. UvrD_like_helicase_C.
[Graphical view ]
Pfami PF03389. MobA_MobL. 1 hit.
PF13538. UvrD_C_2. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 4 hits.
TIGRFAMsi TIGR02768. TraA_Ti. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiTRAA_RHISN
AccessioniPrimary (citable) accession number: P55418
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 26, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3