Reviewed, UniProtKB/Swiss-Prot P55418 (TRAA_RHISN)

Names and origin

Protein names

Recommended name:
    Probable conjugal transfer protein traA

Gene names

Name:	traA
Ordered Locus Names:	NGR_a03980
ORF Names:	y4dS

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	1102 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the mobA/mobL family.

Ontologies

Keywords
Biological process	Conjugation
Ligand	ATP-binding Nucleotide-binding
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological process	unidirectional conjugation Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 1102	1102	Probable conjugal transfer protein traA		PRO_0000210855
Regions
	Nucleotide binding	404 – 411	8	ATP Potential

Sequences

	Sequence		Length	Mass (Da)
	P55418-1 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: EC17A5528F7B9CAF	FASTA	1,102	123,034
	10 20 30 40 50 60 MAVPHFSVSV VARGSGRSAV LSAAYRHCAR MDYEREARTI DYRAKQGLLH EEFVIPAESP 70 80 90 100 110 120 EWLRSMIADR SVASASEAFW NKVEDFEKRS DAQLAKDVTI ALPIELTTEQ NIVLVRDFVE 130 140 150 160 170 180 RHVTAKGMVA DWVYHDAPGN PHVHLMTTLR PLTADGFGAK KLAVVGPDGN SLRNDAGKIV 190 200 210 220 230 240 YELWAGSLDD FNAFRDGWFA CQNRHLALAG LDIRIDGRSF EKQGIELTPT IHLGVGTKAI 250 260 270 280 290 300 ERKATTDDQA VSLERLELQE EKRAENARRI QRRPEIVLDL ITREKSVFDE RDVAKILHRY 310 320 330 340 350 360 IDDPGVFHSL MARILQSPKT LRLERERIAF ATGIRAPAKY TTRELIRLEA EMGSRAIWLS 370 380 390 400 410 420 RRSSHGVRKE VLEAAFSRHS RLSDEQKTAI EHVAGAERIA AVIGRAGAGK TTMMKAAREA 430 440 450 460 470 480 WEAAGYRVVG GALAGKAAEG LEKEAGIASR TLSSWELRWN EGRKQLDDKT IFVLDEAGMV 490 500 510 520 530 540 SSRQMALFVE TATKAGAKLV LVGDPEQLQP IEAGAAFRAI ADRIGYAELE TIYRQREQWM 550 560 570 580 590 600 CDASLDLARG NVGKVVDTYR ANGRMMRSEL KAEAVQNLIA DWDRDYDPTK TTLILAHLRR 610 620 630 640 650 660 DVRMLNQMAR AKLVERGIVD AGFSFKAEDG NRRFAPGDQI VFLKNEGALG VKNGMRGKVV 670 680 690 700 710 720 EAAQNRIVAE IGEVEHRRQV MVESRFYNNL DHGYATTIHK SQGATVDRVK VLASLSLDRH 730 740 750 760 770 780 LTYVAMTRHR EDLGVYYGAR SFAKSGGLIQ ILSQKNSKET TLDYEKATFY RQALRFAEAR 790 800 810 820 830 840 GMHLVNVART IARDRLEWTV RQKQKLADLT QRLVAIGARF GLAVGAKTTN SQNLKETRPM 850 860 870 880 890 900 VAGIATFPKS MEQAVADRLE VDPGLKKQWE DVSTRFHLVY TQPEVAFKAV NVDAMLKDET 910 920 930 940 950 960 VAKSALSNMA NQPESYGSLK GKTGLLASRA DKQDRERAER NVPALAQSLS DYMRQRSRAE 970 980 990 1000 1010 1020 QCYQADELAV RRKVAIEIPA LSPGARQTLE RVRDAIDRND LPAALEFALA DRQVKAELEG 1030 1040 1050 1060 1070 1080 FARAVTERFG ERAFLPLAAK DTNGETFKTI TAGMNPGPKA EVQSAWNTMR TVQQLNAHER 1090 1100 TIEALKQAET LRQTKSQGLS LK

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	U00090 Genomic DNA. Translation: AAB91648.1.
RefSeq	NP_443828.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	962280.
GenomeReviews	Gene locus NGR_a03980 in contig U00090_GR.
KEGG	rhi:NGR_a03980.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG543692.
Family and domain databases
InterPro	IPR005053. MobA_MobL. IPR014136. TraA_Ti. [Graphical view]
Pfam	PF03389. MobA_MobL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

TRAA_RHISN

Accession

Primary (citable) accession number: P55418

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	December 15, 2009
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)