P55415 (Y4DP_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein y4dP

Gene names

Ordered Locus Names:	NGR_a04010
ORF Names:	y4dP

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	200 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

To A.tumefaciens Ti plasmid conjugal transfer region I ORFR2 and ORFR3.

Ontologies

Keywords
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 200	200	Uncharacterized protein y4dP		PRO_0000200824

Sequences

	Sequence		Length	Mass (Da)
	P55415 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: ACF31E9895EED457	FASTA	200	20,995
	10 20 30 40 50 60 MLDAALIKEC ADPSLKPAIV EQFVAAAGST DPLAVSVESG GRLILVPKAT SAGEAMAIVR 70 80 90 100 110 120 QYVGQAVVRV GLTQFPVGVG VKNAADLQPD LVDACENLRK GTSMFAKVLR IVAKSYGNPE 130 140 150 160 170 180 SDDVIPQIFE DAVYAWKTGE FEGVSVFQAP DPGGSVATEE VLRSDDRDSH TQDSASEWPE 190 200 GNDSVGSAAM RIDLSRIGGT

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91645.1.
RefSeq	NP_443825.1. NC_000914.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	P55415.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	962278.
GenomeReviews	Gene locus NGR_a04010 in contig U00090_GR.
KEGG	rhi:NGR_a04010.
PATRIC	32301573. VBIRhiSp122450_0422.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG300446.
OMA	FAKVLRI.
ProtClustDB	PRK13843.
Family and domain databases
InterPro	IPR010680. TraH_2. [Graphical view]
Pfam	PF06871. TraH_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4DP_RHISN

Accession

Primary (citable) accession number: P55415

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program