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P55406

- TRBI_RHISN

UniProt

P55406 - TRBI_RHISN

Protein

Probable conjugal transfer protein TrbI

Gene

trbI

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. conjugation Source: UniProtKB-KW

    Keywords - Biological processi

    Conjugation

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6461-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable conjugal transfer protein TrbI
    Gene namesi
    Name:trbI
    Ordered Locus Names:NGR_a04100
    ORF Names:y4dG
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 431431Probable conjugal transfer protein TrbIPRO_0000065618Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a04100.

    Structurei

    3D structure databases

    ProteinModelPortaliP55406.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei27 – 4721HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the TrbI/VirB10 family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG2948.
    HOGENOMiHOG000289491.
    KOiK03195.
    OMAiDQDIVFP.
    OrthoDBiEOG6VHZ7H.

    Family and domain databases

    InterProiIPR005498. T4SS_VirB10/TraB/TrbI.
    [Graphical view]
    PfamiPF03743. TrbI. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55406-1 [UniParc]FASTAAdd to Basket

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    MVQSLRLGAA NEAEDQNGMR RLNRLPIIVA IVIVALFVGF VVIGLAWRGL    50
    PFNRNNDIHS ASNTPATNFG DQLKRGVTDG IIGEPVKREA FQPTPTMKQK 100
    VDKEPTVVDR PTEPEERRPR LETEEEWKAR LMREQDEQII REAQRQRMAR 150
    LQARATALDS PLKVDISEGE KAPKNSTDTG QNPTATENNA SDLYPAAMKS 200
    GIMGENLDPN AQASKEDFFN QDIKDDGYLP NRVVPQMSVY ELKRGSVIPA 250
    TLITGLNSDL PGRITAQVSQ NVYDSATGYR LLIPQGAKLF GRYDSKVSFG 300
    QERVLVVWTD LIFPNGSTLQ IGGMAGTDAE GYGGFKDRVD RHLWRTWSSA 350
    ALIALIGTGI DMSMPESSTL ATQDTASDAV RRNFAESFGR VAEQTISKNL 400
    NVQPTIRIRP GYKFNVLVDQ DIIFPSAYRD N 431
    Length:431
    Mass (Da):47,769
    Last modified:November 1, 1997 - v1
    Checksum:i062E4462D67FDCA6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92439.1.
    RefSeqiNP_443816.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB92439; AAB92439; NGR_a04100.
    GeneIDi962289.
    KEGGirhi:NGR_a04100.
    PATRICi32301591. VBIRhiSp122450_0431.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92439.1 .
    RefSeqi NP_443816.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55406.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a04100.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB92439 ; AAB92439 ; NGR_a04100 .
    GeneIDi 962289.
    KEGGi rhi:NGR_a04100.
    PATRICi 32301591. VBIRhiSp122450_0431.

    Phylogenomic databases

    eggNOGi COG2948.
    HOGENOMi HOG000289491.
    KOi K03195.
    OMAi DQDIVFP.
    OrthoDBi EOG6VHZ7H.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6461-MONOMER.

    Family and domain databases

    InterProi IPR005498. T4SS_VirB10/TraB/TrbI.
    [Graphical view ]
    Pfami PF03743. TrbI. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiTRBI_RHISN
    AccessioniPrimary (citable) accession number: P55406
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3