Reviewed, UniProtKB/Swiss-Prot P55405 (TRBH_RHISN)

Names and origin

Protein names

Recommended name:
    Probable conjugal transfer protein trbH

Gene names

Name:	trbH
Ordered Locus Names:	NGR_a04110
ORF Names:	y4dF

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

General annotation (Comments)

Subcellular location	Cell membrane; Lipid-anchor Probable.
Sequence similarities	To A.tumefaciens Ti plasmid trbH.

Ontologies

Keywords
Biological process	Conjugation
Cellular component	Cell membrane Membrane
Domain	Signal
PTM	Lipoprotein Palmitate
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological process	conjugation Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	anchored to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 16	16	By similarity
	Chain	17 – 148	132	Probable conjugal transfer protein trbH		PRO_0000022585
Amino acid modifications
	Lipidation	17	1	N-palmitoyl cysteine Probable
	Lipidation	17	1	S-diacylglycerol cysteine Probable

Sequences

	Sequence		Length	Mass (Da)
	P55405-1 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 0ECEC096020FB2E4	FASTA	148	15,076
	10 20 30 40 50 60 MRKLLISFVT VAILSGCQTA EDGLTTSSTP TTVTGPAASA IAGDMASRLA EQIGPSATMT 70 80 90 100 110 120 IKIEKDSSDF ASALEAALKG WGYTVVTDGK VGRVGKDVKL VELGYSIDGV DGQVLARLST 130 140 PSIALGRAYT ATAAGAVPAS PLSIMQRN

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	U00090 Genomic DNA. Translation: AAB92438.1.
RefSeq	NP_443815.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	962275.
GenomeReviews	Gene locus NGR_a04110 in contig U00090_GR.
KEGG	rhi:NGR_a04110.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG301672.
Family and domain databases
PROSITE	PS51257. PROKAR_LIPOPROTEIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

TRBH_RHISN

Accession

Primary (citable) accession number: P55405

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	December 15, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)