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P55401

- TRBK_RHISN

UniProt

P55401 - TRBK_RHISN

Protein

Probable conjugal transfer protein TrbK

Gene

trbK

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Biological processi

    1. conjugation Source: UniProtKB-KW

    Keywords - Biological processi

    Conjugation

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-6585-MONOMER.
    SFRE394:GBYN-6466-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable conjugal transfer protein TrbK
    Gene namesi
    Name:trbK
    Ordered Locus Names:NGR_a04150
    ORF Names:y4dB
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    Subcellular locationi

    Periplasm Curated

    GO - Cellular componenti

    1. periplasmic space Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Periplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1919Sequence AnalysisAdd
    BLAST
    Chaini20 – 6546Probable conjugal transfer protein TrbKPRO_0000022588Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a04150.

    Family & Domainsi

    Sequence similaritiesi

    To A.tumefaciens Ti plasmid TrbK.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    OMAiIKDGQEM.
    OrthoDBiEOG63VC72.

    Family and domain databases

    InterProiIPR020065. Conjugal_tfr_protein_TrbK.
    IPR024475. T4SS_TrbJ/K.
    [Graphical view]
    PfamiPF10907. DUF2749. 1 hit.
    [Graphical view]
    ProDomiPD054381. Conjugal_tfr_protein_TrbK. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    TIGRFAMsiTIGR04361. TrbK_Ti. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P55401-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSRAVIIALV ILVAAVSTTA TALIVNSRAS NPSAPEEQRT AKEKFFGAGK   50
    ALPPIKDGQE MGPRW 65
    Length:65
    Mass (Da):6,864
    Last modified:November 1, 1997 - v1
    Checksum:i31A46C5748A96024
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92434.1.
    RefSeqiNP_443811.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB92434; AAB92434; NGR_a04150.
    GeneIDi962270.
    KEGGirhi:NGR_a04150.
    PATRICi32301601. VBIRhiSp122450_0436.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92434.1 .
    RefSeqi NP_443811.1. NC_000914.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a04150.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB92434 ; AAB92434 ; NGR_a04150 .
    GeneIDi 962270.
    KEGGi rhi:NGR_a04150.
    PATRICi 32301601. VBIRhiSp122450_0436.

    Phylogenomic databases

    OMAi IKDGQEM.
    OrthoDBi EOG63VC72.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-6585-MONOMER.
    SFRE394:GBYN-6466-MONOMER.

    Family and domain databases

    InterProi IPR020065. Conjugal_tfr_protein_TrbK.
    IPR024475. T4SS_TrbJ/K.
    [Graphical view ]
    Pfami PF10907. DUF2749. 1 hit.
    [Graphical view ]
    ProDomi PD054381. Conjugal_tfr_protein_TrbK. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    TIGRFAMsi TIGR04361. TrbK_Ti. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiTRBK_RHISN
    AccessioniPrimary (citable) accession number: P55401
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names

    External Data

    Dasty 3