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P55400

- TRBJ_RHISN

UniProt

P55400 - TRBJ_RHISN

Protein

Probable conjugal transfer protein TrbJ

Gene

trbJ

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. conjugation Source: UniProtKB-KW

    Keywords - Biological processi

    Conjugation

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6467-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable conjugal transfer protein TrbJ
    Gene namesi
    Name:trbJ
    Ordered Locus Names:NGR_a04160
    ORF Names:y4dA
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 267267Probable conjugal transfer protein TrbJPRO_0000065619Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a04160.

    Family & Domainsi

    Sequence similaritiesi

    To A.tumefaciens Ti plasmid TrbJ.Curated

    Phylogenomic databases

    eggNOGiCOG5314.
    HOGENOMiHOG000296061.
    OMAiARREKFF.
    OrthoDBiEOG63RGZ0.

    Family and domain databases

    InterProiIPR014147. T4SS_TrbJ.
    IPR024475. T4SS_TrbJ/K.
    [Graphical view]
    PfamiPF10907. DUF2749. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02780. TrbJ_Ti. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P55400-1 [UniParc]FASTAAdd to Basket

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    MPRRCSMSNN LLAGLAVVAV TVGTGEPADA GTATGVATEW TQVLNNGELV    50
    ALVGKSNEQI QNQLTQISQF AQQIETQLNI YQNLLQNTAT LPSHMWGQVE 100
    RDLNRLRSIV DQGQSIAFSM GNADHVLQQR FQSYATLKTN LPRNETFSST 150
    YQAWSDTNRD TIASTLNAAS LTADQFDSEE TTMSSLRSMS ETADGQMKAL 200
    QVGHEIAAQQ VGQMQKLRGL VSQQMTMMGT WLQTEQTDKD LAQARREKFF 250
    NADVKSIPEG QKMEPRW 267
    Length:267
    Mass (Da):29,579
    Last modified:November 1, 1997 - v1
    Checksum:i2E25B03D0D989533
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92433.1.
    RefSeqiNP_443810.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB92433; AAB92433; NGR_a04160.
    GeneIDi962571.
    KEGGirhi:NGR_a04160.
    PATRICi32301603. VBIRhiSp122450_0437.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92433.1 .
    RefSeqi NP_443810.1. NC_000914.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a04160.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB92433 ; AAB92433 ; NGR_a04160 .
    GeneIDi 962571.
    KEGGi rhi:NGR_a04160.
    PATRICi 32301603. VBIRhiSp122450_0437.

    Phylogenomic databases

    eggNOGi COG5314.
    HOGENOMi HOG000296061.
    OMAi ARREKFF.
    OrthoDBi EOG63RGZ0.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6467-MONOMER.

    Family and domain databases

    InterProi IPR014147. T4SS_TrbJ.
    IPR024475. T4SS_TrbJ/K.
    [Graphical view ]
    Pfami PF10907. DUF2749. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02780. TrbJ_Ti. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiTRBJ_RHISN
    AccessioniPrimary (citable) accession number: P55400
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names

    External Data

    Dasty 3