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P55400

- TRBJ_RHISN

UniProt

P55400 - TRBJ_RHISN

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Protein

Probable conjugal transfer protein TrbJ

Gene
trbJ, NGR_a04160, y4dA
Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. conjugation Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Conjugation

Enzyme and pathway databases

BioCyciSFRE394:GBYN-6467-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable conjugal transfer protein TrbJ
Gene namesi
Name:trbJ
Ordered Locus Names:NGR_a04160
ORF Names:y4dA
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 267267Probable conjugal transfer protein TrbJPRO_0000065619Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a04160.

Family & Domainsi

Sequence similaritiesi

To A.tumefaciens Ti plasmid TrbJ.

Phylogenomic databases

eggNOGiCOG5314.
HOGENOMiHOG000296061.
OMAiARREKFF.
OrthoDBiEOG63RGZ0.

Family and domain databases

InterProiIPR014147. T4SS_TrbJ.
IPR024475. T4SS_TrbJ/K.
[Graphical view]
PfamiPF10907. DUF2749. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02780. TrbJ_Ti. 1 hit.

Sequencei

Sequence statusi: Complete.

P55400-1 [UniParc]FASTAAdd to Basket

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MPRRCSMSNN LLAGLAVVAV TVGTGEPADA GTATGVATEW TQVLNNGELV    50
ALVGKSNEQI QNQLTQISQF AQQIETQLNI YQNLLQNTAT LPSHMWGQVE 100
RDLNRLRSIV DQGQSIAFSM GNADHVLQQR FQSYATLKTN LPRNETFSST 150
YQAWSDTNRD TIASTLNAAS LTADQFDSEE TTMSSLRSMS ETADGQMKAL 200
QVGHEIAAQQ VGQMQKLRGL VSQQMTMMGT WLQTEQTDKD LAQARREKFF 250
NADVKSIPEG QKMEPRW 267
Length:267
Mass (Da):29,579
Last modified:November 1, 1997 - v1
Checksum:i2E25B03D0D989533
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB92433.1.
RefSeqiNP_443810.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB92433; AAB92433; NGR_a04160.
GeneIDi962571.
KEGGirhi:NGR_a04160.
PATRICi32301603. VBIRhiSp122450_0437.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB92433.1 .
RefSeqi NP_443810.1. NC_000914.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a04160.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB92433 ; AAB92433 ; NGR_a04160 .
GeneIDi 962571.
KEGGi rhi:NGR_a04160.
PATRICi 32301603. VBIRhiSp122450_0437.

Phylogenomic databases

eggNOGi COG5314.
HOGENOMi HOG000296061.
OMAi ARREKFF.
OrthoDBi EOG63RGZ0.

Enzyme and pathway databases

BioCyci SFRE394:GBYN-6467-MONOMER.

Family and domain databases

InterProi IPR014147. T4SS_TrbJ.
IPR024475. T4SS_TrbJ/K.
[Graphical view ]
Pfami PF10907. DUF2749. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02780. TrbJ_Ti. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiTRBJ_RHISN
AccessioniPrimary (citable) accession number: P55400
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names

External Data

Dasty 3

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