P55392 (Y4CJ_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative replication protein B

Gene names

Ordered Locus Names:	NGR_a00020
ORF Names:	y4cJ

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	326 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the parB family.

Ontologies

Keywords
Biological process	DNA replication
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 326	326	Putative replication protein B		PRO_0000200818

Sequences

	Sequence		Length	Mass (Da)
	P55392 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 9B2E1A58298BB507	FASTA	326	35,851
	10 20 30 40 50 60 MARKNLLAGL VDTAEIPHAD VAPAYPMRGA SKSMVRSLDE LSRQAEKFLE GETVVELDPE 70 80 90 100 110 120 TLDGSFVSDR MGDSSEQFEE LKQAIAERGQ DTPILVRPHP SAADRYQIVF GHRRARVARE 130 140 150 160 170 180 LGRKVKAVVK ALDDRTHVIA QGQENSARAN LSFIERANFA SHLEKLGYDR TIIGSALAAN 190 200 210 220 230 240 AAAISKMIAV IDRIPEETIA RIGPCPAVGR ERWVELSLLV GKTANEAKVK AIVSDPSFNE 250 260 270 280 290 300 LSTDDRFNSL FSGLNSAAKP VRKTTPKILE NWQPADKTVS AKYSNSAKAF ALSMKSRNAG 310 320 PFGRYIADNL DRLYAEFLEQ GNRKED

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB92425.1.
RefSeq	NP_443802.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55392.
ModBase	Search...
Protein-protein interaction databases
STRING	P55392.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	962263.
GenomeReviews	Gene locus NGR_a00020 in contig U00090_GR.
KEGG	rhi:NGR_a00020.
PATRIC	32300733. VBIRhiSp122450_0002.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG465861.
OMA	ERWVELS.
ProtClustDB	CLSK516078.
Family and domain databases
InterPro	IPR004437. ParB_part. IPR003115. ParBc. IPR017819. Plasmid_partition_RepB. IPR011111. Plasmid_RepB. [Graphical view]
Pfam	PF02195. ParBc. 1 hit. PF07506. RepB. 1 hit. [Graphical view]
SMART	SM00470. ParB. 1 hit. [Graphical view]
SUPFAM	SSF110849. ParBc. 1 hit.
TIGRFAMs	TIGR00180. ParB_part. 1 hit. TIGR03454. Partition_RepB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y4CJ_RHISN

Accession

Primary (citable) accession number: P55392

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program