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P55389 (Y4CG_RHISN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable DNA-invertase y4cG
Gene names
Ordered Locus Names:NGR_a00070
ORF Names:y4cG
Encoded onPlasmid sym pNGR234a
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length305 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the site-specific recombinase resolvase family.

Ontologies

Keywords
   Biological processDNA integration
DNA recombination
   LigandDNA-binding
   Molecular functionDNA invertase
   Technical termComplete proteome
Plasmid
Gene Ontology (GO)
   Biological_processDNA integration

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

recombinase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 305305Probable DNA-invertase y4cG
PRO_0000196386

Sites

Active site231O-(5'-phospho-DNA)-serine intermediate By similarity

Sequences

Sequence LengthMass (Da)Tools
P55389 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 48C03BD3A4A9420F

FASTA30534,277
        10         20         30         40         50         60 
MATAAYLNSP SLQQRLIGYA RVSTEDQLND AQVDELRAAG CHRIHQEHGS GASRARPVLA 

        70         80         90        100        110        120 
KLLKDLAMGD VLVVVRLDRL ARSVSHLLDV IEDLEKRGVH FRSLRDPIDT STPHGMFSLQ 

       130        140        150        160        170        180 
VLGAVAQLER ALIAERTKSG MQAAKARGRL AGNPGLRERR PEAIRAVSAA RERAYLDELI 

       190        200        210        220        230        240 
VSAQTWLPTV RRLRPRHSWD NVVRILNRRG HDWTVERLRR AVHRLVREKL AEPELLARSL 

       250        260        270        280        290        300 
RRPPEDHLMR LVAGIAIADP NLSLRDIAAQ LDQMQERPPR GGRKWQPSSV RALLDEASRI 


GLVRA 

« Hide

References

[1]"Molecular basis of symbiosis between Rhizobium and legumes."
Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00090 Genomic DNA. Translation: AAB92422.1.
RefSeqNP_443799.1. NC_000914.2.

3D structure databases

ProteinModelPortalP55389.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_a00070.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB92422; AAB92422; NGR_a00070.
GeneID962300.
KEGGrhi:NGR_a00070.
PATRIC32300739. VBIRhiSp122450_0005.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1961.
HOGENOMHOG000268365.
OMAHTWDDIA.
OrthoDBEOG6MD98B.

Enzyme and pathway databases

BioCycRETL1328306-WGS:GSTH-5842-MONOMER.
RETL1328306-WGS:GSTH-6334-MONOMER.
SFRE394:GBYN-6058-MONOMER.

Family and domain databases

Gene3D3.40.50.1390. 1 hit.
InterProIPR006118. Recombinase_CS.
IPR006119. Resolv_N.
[Graphical view]
PfamPF00239. Resolvase. 1 hit.
[Graphical view]
SMARTSM00857. Resolvase. 1 hit.
[Graphical view]
SUPFAMSSF53041. SSF53041. 1 hit.
PROSITEPS00397. RECOMBINASES_1. 1 hit.
PS00398. RECOMBINASES_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY4CG_RHISN
AccessionPrimary (citable) accession number: P55389
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 9, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rhizobium plasmid pNGR234a

Rhizobium plasmid pNGR234a: entries and gene names