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P55389

- Y4CG_RHISN

UniProt

P55389 - Y4CG_RHISN

Protein

Probable DNA-invertase y4cG

Gene

NGR_a00070

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei23 – 231O-(5'-phospho-DNA)-serine intermediatePROSITE-ProRule annotation

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. recombinase activity Source: UniProtKB-KW

    GO - Biological processi

    1. DNA integration Source: UniProtKB-KW

    Keywords - Molecular functioni

    DNA invertase

    Keywords - Biological processi

    DNA integration, DNA recombination

    Keywords - Ligandi

    DNA-binding

    Enzyme and pathway databases

    BioCyciRETL1328306-WGS:GSTH-5842-MONOMER.
    RETL1328306-WGS:GSTH-6334-MONOMER.
    SFRE394:GBYN-6058-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable DNA-invertase y4cG
    Gene namesi
    Ordered Locus Names:NGR_a00070
    ORF Names:y4cG
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 305305Probable DNA-invertase y4cGPRO_0000196386Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a00070.

    Structurei

    3D structure databases

    ProteinModelPortaliP55389.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG1961.
    HOGENOMiHOG000268365.
    OMAiHTWDDIA.
    OrthoDBiEOG6MD98B.

    Family and domain databases

    Gene3Di3.40.50.1390. 1 hit.
    InterProiIPR006118. Recombinase_CS.
    IPR006119. Resolv_N.
    [Graphical view]
    PfamiPF00239. Resolvase. 1 hit.
    [Graphical view]
    SMARTiSM00857. Resolvase. 1 hit.
    [Graphical view]
    SUPFAMiSSF53041. SSF53041. 1 hit.
    PROSITEiPS00397. RECOMBINASES_1. 1 hit.
    PS00398. RECOMBINASES_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P55389-1 [UniParc]FASTAAdd to Basket

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    MATAAYLNSP SLQQRLIGYA RVSTEDQLND AQVDELRAAG CHRIHQEHGS    50
    GASRARPVLA KLLKDLAMGD VLVVVRLDRL ARSVSHLLDV IEDLEKRGVH 100
    FRSLRDPIDT STPHGMFSLQ VLGAVAQLER ALIAERTKSG MQAAKARGRL 150
    AGNPGLRERR PEAIRAVSAA RERAYLDELI VSAQTWLPTV RRLRPRHSWD 200
    NVVRILNRRG HDWTVERLRR AVHRLVREKL AEPELLARSL RRPPEDHLMR 250
    LVAGIAIADP NLSLRDIAAQ LDQMQERPPR GGRKWQPSSV RALLDEASRI 300
    GLVRA 305
    Length:305
    Mass (Da):34,277
    Last modified:November 1, 1997 - v1
    Checksum:i48C03BD3A4A9420F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92422.1.
    RefSeqiNP_443799.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB92422; AAB92422; NGR_a00070.
    GeneIDi962300.
    KEGGirhi:NGR_a00070.
    PATRICi32300739. VBIRhiSp122450_0005.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB92422.1 .
    RefSeqi NP_443799.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55389.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a00070.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB92422 ; AAB92422 ; NGR_a00070 .
    GeneIDi 962300.
    KEGGi rhi:NGR_a00070.
    PATRICi 32300739. VBIRhiSp122450_0005.

    Phylogenomic databases

    eggNOGi COG1961.
    HOGENOMi HOG000268365.
    OMAi HTWDDIA.
    OrthoDBi EOG6MD98B.

    Enzyme and pathway databases

    BioCyci RETL1328306-WGS:GSTH-5842-MONOMER.
    RETL1328306-WGS:GSTH-6334-MONOMER.
    SFRE394:GBYN-6058-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1390. 1 hit.
    InterProi IPR006118. Recombinase_CS.
    IPR006119. Resolv_N.
    [Graphical view ]
    Pfami PF00239. Resolvase. 1 hit.
    [Graphical view ]
    SMARTi SM00857. Resolvase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53041. SSF53041. 1 hit.
    PROSITEi PS00397. RECOMBINASES_1. 1 hit.
    PS00398. RECOMBINASES_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4CG_RHISN
    AccessioniPrimary (citable) accession number: P55389
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3