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P55389

- Y4CG_RHISN

UniProt

P55389 - Y4CG_RHISN

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Protein

Probable DNA-invertase y4cG

Gene

NGR_a00070

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei23 – 231O-(5'-phospho-DNA)-serine intermediatePROSITE-ProRule annotation

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. recombinase activity Source: UniProtKB-KW

GO - Biological processi

  1. DNA integration Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

DNA invertase

Keywords - Biological processi

DNA integration, DNA recombination

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-5842-MONOMER.
RETL1328306-WGS:GSTH-6334-MONOMER.
SFRE394:GBYN-6058-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable DNA-invertase y4cG
Gene namesi
Ordered Locus Names:NGR_a00070
ORF Names:y4cG
Encoded oniPlasmid sym pNGR234a0 Publication
OrganismiRhizobium sp. (strain NGR234)
Taxonomic identifieri394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001054: Plasmid sym pNGR234a

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 305305Probable DNA-invertase y4cGPRO_0000196386Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394.NGR_a00070.

Structurei

3D structure databases

ProteinModelPortaliP55389.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1961.
HOGENOMiHOG000268365.
OMAiHTWDDIA.
OrthoDBiEOG6MD98B.

Family and domain databases

Gene3Di3.40.50.1390. 1 hit.
InterProiIPR006118. Recombinase_CS.
IPR006119. Resolv_N.
[Graphical view]
PfamiPF00239. Resolvase. 1 hit.
[Graphical view]
SMARTiSM00857. Resolvase. 1 hit.
[Graphical view]
SUPFAMiSSF53041. SSF53041. 1 hit.
PROSITEiPS00397. RECOMBINASES_1. 1 hit.
PS00398. RECOMBINASES_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P55389-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATAAYLNSP SLQQRLIGYA RVSTEDQLND AQVDELRAAG CHRIHQEHGS
60 70 80 90 100
GASRARPVLA KLLKDLAMGD VLVVVRLDRL ARSVSHLLDV IEDLEKRGVH
110 120 130 140 150
FRSLRDPIDT STPHGMFSLQ VLGAVAQLER ALIAERTKSG MQAAKARGRL
160 170 180 190 200
AGNPGLRERR PEAIRAVSAA RERAYLDELI VSAQTWLPTV RRLRPRHSWD
210 220 230 240 250
NVVRILNRRG HDWTVERLRR AVHRLVREKL AEPELLARSL RRPPEDHLMR
260 270 280 290 300
LVAGIAIADP NLSLRDIAAQ LDQMQERPPR GGRKWQPSSV RALLDEASRI

GLVRA
Length:305
Mass (Da):34,277
Last modified:November 1, 1997 - v1
Checksum:i48C03BD3A4A9420F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB92422.1.
RefSeqiNP_443799.1. NC_000914.2.

Genome annotation databases

EnsemblBacteriaiAAB92422; AAB92422; NGR_a00070.
GeneIDi962300.
KEGGirhi:NGR_a00070.
PATRICi32300739. VBIRhiSp122450_0005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00090 Genomic DNA. Translation: AAB92422.1 .
RefSeqi NP_443799.1. NC_000914.2.

3D structure databases

ProteinModelPortali P55389.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 394.NGR_a00070.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB92422 ; AAB92422 ; NGR_a00070 .
GeneIDi 962300.
KEGGi rhi:NGR_a00070.
PATRICi 32300739. VBIRhiSp122450_0005.

Phylogenomic databases

eggNOGi COG1961.
HOGENOMi HOG000268365.
OMAi HTWDDIA.
OrthoDBi EOG6MD98B.

Enzyme and pathway databases

BioCyci RETL1328306-WGS:GSTH-5842-MONOMER.
RETL1328306-WGS:GSTH-6334-MONOMER.
SFRE394:GBYN-6058-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1390. 1 hit.
InterProi IPR006118. Recombinase_CS.
IPR006119. Resolv_N.
[Graphical view ]
Pfami PF00239. Resolvase. 1 hit.
[Graphical view ]
SMARTi SM00857. Resolvase. 1 hit.
[Graphical view ]
SUPFAMi SSF53041. SSF53041. 1 hit.
PROSITEi PS00397. RECOMBINASES_1. 1 hit.
PS00398. RECOMBINASES_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Molecular basis of symbiosis between Rhizobium and legumes."
    Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
    Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NGR234.

Entry informationi

Entry nameiY4CG_RHISN
AccessioniPrimary (citable) accession number: P55389
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 1, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Rhizobium plasmid pNGR234a
    Rhizobium plasmid pNGR234a: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3