Reviewed, UniProtKB/Swiss-Prot P55389 (Y4CG_RHISN)

Names and origin

Protein names

Recommended name:
    Probable DNA-invertase y4cG

Gene names

Ordered Locus Names:	NGR_a00070
ORF Names:	y4cG

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length	305 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the site-specific recombinase resolvase family.

Ontologies

Keywords
Biological process	DNA integration DNA recombination
Ligand	DNA-binding
Molecular function	DNA invertase
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological process	DNA integration Inferred from electronic annotation. Source: UniProtKB-KW DNA recombination Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW recombinase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 305	305	Probable DNA-invertase y4cG		PRO_0000196386
Sites
	Active site	23	1	O-(5'-phospho-DNA)-serine intermediate By similarity

Sequences

	Sequence		Length	Mass (Da)
	P55389-1 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 48C03BD3A4A9420F	FASTA	305	34,277
	10 20 30 40 50 60 MATAAYLNSP SLQQRLIGYA RVSTEDQLND AQVDELRAAG CHRIHQEHGS GASRARPVLA 70 80 90 100 110 120 KLLKDLAMGD VLVVVRLDRL ARSVSHLLDV IEDLEKRGVH FRSLRDPIDT STPHGMFSLQ 130 140 150 160 170 180 VLGAVAQLER ALIAERTKSG MQAAKARGRL AGNPGLRERR PEAIRAVSAA RERAYLDELI 190 200 210 220 230 240 VSAQTWLPTV RRLRPRHSWD NVVRILNRRG HDWTVERLRR AVHRLVREKL AEPELLARSL 250 260 270 280 290 300 RRPPEDHLMR LVAGIAIADP NLSLRDIAAQ LDQMQERPPR GGRKWQPSSV RALLDEASRI GLVRA

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	U00090 Genomic DNA. Translation: AAB92422.1.
RefSeq	NP_443799.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	962300.
GenomeReviews	Gene locus NGR_a00070 in contig U00090_GR.
KEGG	rhi:NGR_a00070.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG294912.
Family and domain databases
InterPro	IPR006118. Recombinase_CS. IPR006119. Resolv_N. [Graphical view]
Gene3D	G3DSA:3.40.50.1390. Resolv_N. 1 hit.
Pfam	PF00239. Resolvase. 1 hit. [Graphical view]
SMART	SM00857. Resolvase. 1 hit. [Graphical view]
PROSITE	PS00397. RECOMBINASES_1. 1 hit. PS00398. RECOMBINASES_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4CG_RHISN

Accession

Primary (citable) accession number: P55389

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	December 15, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)