P55387 (Y4CE_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein y4cE

Gene names

Ordered Locus Names:	NGR_a00090
ORF Names:	y4cE

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium

Protein attributes

Sequence length	391 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological process	DNA restriction-modification system Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro endonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 391	391	Uncharacterized protein y4cE		PRO_0000200815

Sequences

	Sequence		Length	Mass (Da)
	P55387 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: F5E9F606AA1FB41B	FASTA	391	43,362
	10 20 30 40 50 60 MGLRDPGAKR ACPTFAGRKR HVVKIDTNTF KFGFLNPQVR LYGYHQIRLV IRYGNIGRST 70 80 90 100 110 120 RLGRLLGKLS AAECDALDLE LNKLRANESL DPQESELVLG RVLEPLFGIE GYEVEHTGGL 130 140 150 160 170 180 NDQGIDFRAS RTADETSSAP AETIGVQAKF YRKTVSRVGM ADLQKLIGAA LLQDLTRVVL 190 200 210 220 230 240 VSNGEFPREA HAAVEKSLPL RIELLDIGGM RAWISRLREE KVDVEAEVRI MLRDLSSGLA 250 260 270 280 290 300 RLIAKSPDAL DHLEWRMVEQ VVAEVFEGLG FAVTLTPGSK DGGKDVILTC TVRGKLAEYY 310 320 330 340 350 360 VEIKHWRSST KVGSAAVEKL LKIIVEEKKD GGLFLSTYGF TSNAFEQLTT IAKHKLKFGD 370 380 390 QEKIVTFCQT YVKAKAGLWS PPENLTEVLF A

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed: 9163424] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed: 19376903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91635.1.
PIR	T28632.
RefSeq	NP_443797.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55387.
ModBase	Search...
Protein-protein interaction databases
STRING	P55387.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	962585.
GenomeReviews	Gene locus NGR_a00090 in contig U00090_GR.
KEGG	rhi:NGR_a00090.
PATRIC	32300743. VBIRhiSp122450_0007.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG682456.
OMA	EAEVRIM.
ProtClustDB	CLSK808995.
Family and domain databases
InterPro	IPR011856. Endonuc_TnsA/Hjc/tRNA. IPR011335. Restrct_endonuc_II-like. IPR007560. Restrct_endonuc_IV-like_Mrr. [Graphical view]
Gene3D	G3DSA:3.40.1350.10. Endonuc_TnsA/Hjc/tRNA. 2 hits.
Pfam	PF04471. Mrr_cat. 2 hits. [Graphical view]
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 2 hits.
ProtoNet	Search...

Entry information

Entry name

Y4CE_RHISN

Accession

Primary (citable) accession number: P55387

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program