P55386 (Y4CD_RHISN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein y4cD

Gene names

Ordered Locus Names:	NGR_a00100
ORF Names:	y4cD

Encoded on

Plasmid sym pNGR234a

Organism

Rhizobium sp. (strain NGR234) [Complete proteome] [HAMAP]

Taxonomic identifier

394 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	640 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid
Gene Ontology (GO)
Biological_process	signal transduction Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 640	640	Uncharacterized protein y4cD		PRO_0000200814

Sequences

	Sequence		Length	Mass (Da)
	P55386 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 829BF90C595A3C0E	FASTA	640	71,610
	10 20 30 40 50 60 MKYDFSTLSP DDFENLSRDL VGAETGVRFE AFTVGADDGM DGRHAKADGS IILQAKHYLR 70 80 90 100 110 120 SGFSKLKSKM REERVSIDEL APQRYILTTS VPLTPANKAT LTEIIGPSLV GPGDIFGADD 130 140 150 160 170 180 LNGLLRSYPE IVKAHEGLWA HSTPVLEEVV TNAVRKAMAP AEVPKTLARL MPPPGAADAP 190 200 210 220 230 240 IEPVKRDTIF IIKASPIDDE FTLWLAPKLE AEGYQVFADV LTLMPGERWR REITSALRHR 250 260 270 280 290 300 AVKVLLLCRD SSLEDSSIQD DLDIALETGK ELGDQRFVIP LRMETFRKIK GLGDTVAVDF 310 320 330 340 350 360 VRNWGEGLLK LIDTLQRQKV QRSIDTMINP NWEIYRRRGA VPIIEVPERL TSNWLRVAEA 370 380 390 400 410 420 PDFIRYFECS GSINKGRLQG AIDSYGHPCA LVGGSGFLAF GGVPEIEMAF EAVGRFKLKH 430 440 450 460 470 480 EIPLVEFTEG GFQRLRIDRQ IASNLVVAML KKAWFNYCKR NGFIEHGYSN GIGFHASPEQ 490 500 510 520 530 540 APTGKRIPWG NQAEKKRSSM LRNSAKGHIW QFGVTAMPAF WPFWHFKLKS RVLFAQDNDT 550 560 570 580 590 600 PAGLVVDDPK KLHRLRRSVC KGWRNKQWYG RLLAFLELLS GESAFVRLPL SETETFVIEA 610 620 630 640 SPMLFSSPVS TVLPNDLDDE DEELDDSTLG RPDSDEEGGE

References

[1]

"Molecular basis of symbiosis between Rhizobium and legumes." Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X. Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

[2]

"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems." Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R. Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NGR234.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00090 Genomic DNA. Translation: AAB91634.1.
PIR	T28631.
RefSeq	NP_443796.1. NC_000914.2.
3D structure databases
ProteinModelPortal	P55386.
ModBase	Search...
Protein-protein interaction databases
STRING	394.NGR_a00100.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB91634; AAB91634; NGR_a00100.
GeneID	962586.
KEGG	rhi:NGR_a00100.
PATRIC	32300747. VBIRhiSp122450_0009.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG82334.
HOGENOM	HOG000288132.
OMA	CKGWRNK.
ProtClustDB	CLSK893850.
Family and domain databases
InterPro	IPR000157. TIR_dom. [Graphical view]
Pfam	PF13676. TIR_2. 1 hit. [Graphical view]
SMART	SM00255. TIR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y4CD_RHISN

Accession

Primary (citable) accession number: P55386

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program