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P55386

- Y4CD_RHISN

UniProt

P55386 - Y4CD_RHISN

Protein

Uncharacterized protein y4cD

Gene

NGR_a00100

Organism
Rhizobium sp. (strain NGR234)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. signal transduction Source: InterPro

    Enzyme and pathway databases

    BioCyciSFRE394:GBYN-6061-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein y4cD
    Gene namesi
    Ordered Locus Names:NGR_a00100
    ORF Names:y4cD
    Encoded oniPlasmid sym pNGR234a0 Publication
    OrganismiRhizobium sp. (strain NGR234)
    Taxonomic identifieri394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001054: Plasmid sym pNGR234a

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 640640Uncharacterized protein y4cDPRO_0000200814Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi394.NGR_a00100.

    Structurei

    3D structure databases

    ProteinModelPortaliP55386.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG82334.
    HOGENOMiHOG000288132.
    OMAiCKGWRNK.
    OrthoDBiEOG63Z73S.

    Family and domain databases

    InterProiIPR000157. TIR_dom.
    [Graphical view]
    PfamiPF13676. TIR_2. 1 hit.
    [Graphical view]
    SMARTiSM00255. TIR. 1 hit.
    [Graphical view]
    SUPFAMiSSF52200. SSF52200. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P55386-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKYDFSTLSP DDFENLSRDL VGAETGVRFE AFTVGADDGM DGRHAKADGS    50
    IILQAKHYLR SGFSKLKSKM REERVSIDEL APQRYILTTS VPLTPANKAT 100
    LTEIIGPSLV GPGDIFGADD LNGLLRSYPE IVKAHEGLWA HSTPVLEEVV 150
    TNAVRKAMAP AEVPKTLARL MPPPGAADAP IEPVKRDTIF IIKASPIDDE 200
    FTLWLAPKLE AEGYQVFADV LTLMPGERWR REITSALRHR AVKVLLLCRD 250
    SSLEDSSIQD DLDIALETGK ELGDQRFVIP LRMETFRKIK GLGDTVAVDF 300
    VRNWGEGLLK LIDTLQRQKV QRSIDTMINP NWEIYRRRGA VPIIEVPERL 350
    TSNWLRVAEA PDFIRYFECS GSINKGRLQG AIDSYGHPCA LVGGSGFLAF 400
    GGVPEIEMAF EAVGRFKLKH EIPLVEFTEG GFQRLRIDRQ IASNLVVAML 450
    KKAWFNYCKR NGFIEHGYSN GIGFHASPEQ APTGKRIPWG NQAEKKRSSM 500
    LRNSAKGHIW QFGVTAMPAF WPFWHFKLKS RVLFAQDNDT PAGLVVDDPK 550
    KLHRLRRSVC KGWRNKQWYG RLLAFLELLS GESAFVRLPL SETETFVIEA 600
    SPMLFSSPVS TVLPNDLDDE DEELDDSTLG RPDSDEEGGE 640
    Length:640
    Mass (Da):71,610
    Last modified:November 1, 1997 - v1
    Checksum:i829BF90C595A3C0E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91634.1.
    PIRiT28631.
    RefSeqiNP_443796.1. NC_000914.2.

    Genome annotation databases

    EnsemblBacteriaiAAB91634; AAB91634; NGR_a00100.
    GeneIDi962586.
    KEGGirhi:NGR_a00100.
    PATRICi32300747. VBIRhiSp122450_0009.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00090 Genomic DNA. Translation: AAB91634.1 .
    PIRi T28631.
    RefSeqi NP_443796.1. NC_000914.2.

    3D structure databases

    ProteinModelPortali P55386.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 394.NGR_a00100.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB91634 ; AAB91634 ; NGR_a00100 .
    GeneIDi 962586.
    KEGGi rhi:NGR_a00100.
    PATRICi 32300747. VBIRhiSp122450_0009.

    Phylogenomic databases

    eggNOGi NOG82334.
    HOGENOMi HOG000288132.
    OMAi CKGWRNK.
    OrthoDBi EOG63Z73S.

    Enzyme and pathway databases

    BioCyci SFRE394:GBYN-6061-MONOMER.

    Family and domain databases

    InterProi IPR000157. TIR_dom.
    [Graphical view ]
    Pfami PF13676. TIR_2. 1 hit.
    [Graphical view ]
    SMARTi SM00255. TIR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52200. SSF52200. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular basis of symbiosis between Rhizobium and legumes."
      Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A., Perret X.
      Nature 387:394-401(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NGR234.

    Entry informationi

    Entry nameiY4CD_RHISN
    AccessioniPrimary (citable) accession number: P55386
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. Rhizobium plasmid pNGR234a
      Rhizobium plasmid pNGR234a: entries and gene names

    External Data

    Dasty 3